Name: [Hs00498614_cn] [HERC2]
Creator: Thermo Fisher Scientific
Keywords: [HERC2] Assay, [HECT and RLD domain containing E3 ubiquitin protein ligase 2] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	8924
Gene Name:	HECT and RLD domain containing E3 ubiquitin protein ligase 2
Gene Aliases:	D15F37S1, MRT38, SHEP1, jdf2, p528
Location:	Chr.15:28111037-28322173 on Build GRCh38
Assay Gene Location:	Within Exon 90

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HERC2	NM_004667.5	85	13244	NP_004658.3
	XM_005268276.4	84	13374	XP_005268333.1
	XM_006720726.3	85	13250	XP_006720789.1
	XM_006720727.3	83	13007	XP_006720790.1
	XM_011522131.2	83	13031	XP_011520433.1
	XM_011522133.2	66	10010	XP_011520435.1
	XM_017022695.1	84	13191	XP_016878184.1
	XM_017022696.1	84	13134	XP_016878185.1
	XM_017022697.1	44	6573	XP_016878186.1
	XM_017022698.1	44	6484	XP_016878187.1
	AF071172.3	85	13196	AAD08657.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3635988	Chr.15:28098445 - 28194723 on Build GRCh38	Gain	OCA2 HERC2
nsv428299	Chr.15:28042424 - 28817373 on Build GRCh38	Loss	MIR4509-2 GOLGA8G HERC2 HERC2P11 LOC645202 LOC100132202 OCA2 HERC2P9 GOLGA8F GOLGA8M WHAMMP2 PDCD6IPP2 MIR4509-3 LOC101929047 LOC100289656
nsv568663	Chr.15:27783102 - 28176880 on Build GRCh38	Loss	OCA2 HERC2
nsv1039684	Chr.15:28080438 - 28315658 on Build GRCh38	Gain	OCA2 HERC2
nsv1052131	Chr.15:27932591 - 28460005 on Build GRCh38	Gain	OCA2 MIR4509-2 HERC2 GOLGA8F LOC645202
nsv1038472	Chr.15:27647423 - 28256473 on Build GRCh38	Gain	OCA2 HERC2
nsv568662	Chr.15:27726493 - 29056123 on Build GRCh38	Gain	MIR4509-2 GOLGA8G HERC2 LOC107984752 HERC2P11 LOC645202 APBA2 LOC100132202 OCA2 HERC2P9 GOLGA8F GOLGA8M WHAMMP2 GOLGA6L7P PDCD6IPP2 MIR4509-3 LOC101929047 LOC100289656
nsv1047941	Chr.15:28110984 - 28168961 on Build GRCh38	Gain	HERC2