Hs00544315_cn

• Gene Symbol: LRRC26
• Assay Reference Genome Location: Chr.9:137169187 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 389816
• Gene Name: leucine rich repeat containing 26
• Gene Aliases: CAPC, bA350O14.10
• Location: Chr.9:137168758-137170039 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRRC26	NM_001013653.2			NP_001013675.1
	BC140911.1
	CB160046.1
	DQ355157.1			ABC79623.1
	EU588721.1

Target Gene Details

• Entrez Gene ID: 100500811
• Gene Name: microRNA 3621
• Gene Aliases: -
• Location: Chr.9:137169186-137169270 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR3621	NR_037416.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3622023	Chr.9:137165910 - 137174346 on Build GRCh38	Gain	GRIN1 TMEM210 MIR3621 LRRC26
dgv13007n54	Chr.9:136966179 - 137173890 on Build GRCh38	Loss	MAN1B1-AS1 CLIC3 TMEM210 MIR3621 MAN1B1 LOC101930307 C9orf139 DPP7 PTGDS ENTPD2 C9orf142 LCNL1 GRIN1 ABCA2 UAP1L1 FUT7 LRRC26 PRR31 SAPCD2 NPDC1
nsv616007	Chr.9:137079368 - 137240666 on Build GRCh38	Loss	MAN1B1-AS1 RNF208 TMEM210 MIR3621 MAN1B1 LOC101930307 ANAPC2 NDOR1 DPP7 SSNA1 TMEM203 RNF224 GRIN1 TPRN UAP1L1 CYSRT1 LRRC26 SLC34A3
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	MAN1B1-AS1 EXD3 ANAPC2 TUBB4B C9orf142 LCNL1 MIR4479 PHPT1 CYSRT1 EDF1 PRR31 NPDC1 NOXA1 MAN1B1 LOC101930307 NSMF PTGDS TMEM203 RNF224 GRIN1 LCN12 LRRC26 CCDC183 RNF208 CLIC3 NDOR1 C9orf172 SSNA1 ENTPD8 FBXW5 MIR4292 TOR4A TPRN UAP1L1 C8G SLC34A3 MAMDC4 PNPLA7 TRAF2 TMEM210 MIR3621 RABL6 STPG3 C9orf139 NRARP DPP7 ENTPD2 CCDC183-AS1 FAM166A ABCA2 MIR7114 FUT7 C9orf173-AS1 SAPCD2 NELFB
nsv951207	Chr.9:137136949 - 137379148 on Build GRCh38	Deletion	EXD3 RNF208 TMEM210 MIR3621 STPG3 ANAPC2 NDOR1 NRARP TUBB4B FAM166A SSNA1 TMEM203 RNF224 GRIN1 TOR4A TPRN CYSRT1 LRRC26 C9orf173-AS1 NELFB SLC34A3
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	MAN1B1-AS1 SNAPC4 C9orf142 LCNL1 MIR4479 CARD9 PHPT1 LCN8 PMPCA EDF1 C9orf163 PRR31 SNORA17A NPDC1 SEC16A NOTCH1 MAN1B1 LOC101930307 PTGDS GRIN1 SNHG7 LCN12 LCN10 LRRC26 LCN15 CCDC183 SDCCAG3 CLIC3 INPP5E C9orf172 FAM69B FBXW5 MIR4292 MIR126 UAP1L1 C8G EGFL7 TMEM141 MAMDC4 TRAF2 HSPC324 MIR6722 TMEM210 MIR3621 RABL6 DNLZ MIR4674 C9orf139 LOC100128593 AGPAT2 DPP7 ENTPD2 CCDC183-AS1 MIR4673 LCN6 ABCA2 LINC01451 FUT7 NALT1 SNORA17B SAPCD2
nsv1161918	Chr.9:137118319 - 137438026 on Build GRCh38	Duplication	EXD3 NOXA1 RNF208 TMEM210 MIR3621 STPG3 ANAPC2 NDOR1 NRARP TUBB4B FAM166A SSNA1 TMEM203 RNF224 ENTPD8 GRIN1 TOR4A TPRN CYSRT1 LRRC26 C9orf173-AS1 NELFB SLC34A3
nsv616005	Chr.9:137036493 - 137173890 on Build GRCh38	Loss	MAN1B1-AS1 TMEM210 MIR3621 MAN1B1 LOC101930307 C9orf139 DPP7 ENTPD2 GRIN1 UAP1L1 LRRC26 SAPCD2 NPDC1
esv2761561	Chr.9:137030185 - 137191593 on Build GRCh38	Gain	MAN1B1-AS1 TMEM210 MIR3621 MAN1B1 LOC101930307 C9orf139 ANAPC2 DPP7 ENTPD2 SSNA1 GRIN1 UAP1L1 FUT7 LRRC26 SAPCD2 NPDC1
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	MAN1B1-AS1 EXD3 ANAPC2 TUBB4B C9orf142 LCNL1 MIR4479 PHPT1 LCN8 CYSRT1 EDF1 PRR31 SNORA17A NPDC1 MAN1B1 LOC101930307 PTGDS TMEM203 RNF224 GRIN1 SNHG7 LCN12 LCN10 LRRC26 LCN15 CCDC183 RNF208 CLIC3 NDOR1 C9orf172 SSNA1 FAM69B FBXW5 MIR4292 TOR4A MIR126 TPRN UAP1L1 C8G EGFL7 SLC34A3 TMEM141 MAMDC4 TRAF2 HSPC324 MIR6722 TMEM210 MIR3621 RABL6 STPG3 C9orf139 LOC100128593 NRARP AGPAT2 DPP7 ENTPD2 CCDC183-AS1 FAM166A LCN6 ABCA2 LINC01451 FUT7 SNORA17B C9orf173-AS1 SAPCD2 NELFB

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

ion transport

Function(s)

protein binding
potassium channel regulator activity