Hs00546355_cn

• Gene Symbol: LOXL2
• Assay Reference Genome Location: Chr.8:23309685 on build GRCh38
• Cytoband: 8p21.3

Target Gene Details

• Entrez Gene ID: 4017
• Gene Name: lysyl oxidase like 2
• Gene Aliases: LOR2, WS9-14
• Location: Chr.8:23296897-23404209 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOXL2	NM_002318.2			NP_002309.1
	AF117949.1			AAD34343.1
	AK098436.1
	AK222477.1			BAD96197.1
	AK293292.1
	AK312266.1
	BC000594.2			AAH00594.1
	KF928961.1
	KF975332.1
	U89942.1			AAB49697.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv7139n100	Chr.8:23292116 - 23464357 on Build GRCh38	Loss	LOXL2 LOC100507156 R3HCC1 ENTPD4
nsv1026345	Chr.8:23302920 - 23541056 on Build GRCh38	Gain	SLC25A37 LOXL2 LOC100507156 ENTPD4
nsv1017570	Chr.8:22969562 - 23544783 on Build GRCh38	Gain	RHOBTB2 TNFRSF10D SLC25A37 LOC107984124 TNFRSF10A LOC100507156 R3HCC1 LOC254896 LOC389641 LOC286059 LOXL2 TNFRSF10B CHMP7 ENTPD4 TNFRSF10C

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Process(es)

response to hypoxia
epithelial to mesenchymal transition
endothelial cell proliferation
sprouting angiogenesis
transcription, DNA-templated
cellular protein modification process
receptor-mediated endocytosis
cell adhesion
aging
histone modification
protein deamination
collagen fibril organization
positive regulation of chondrocyte differentiation
endothelial cell migration
negative regulation of transcription, DNA-templated
response to copper ion
oxidation-reduction process

Function(s)

chromatin binding
transcription corepressor activity
protein-lysine 6-oxidase activity
scavenger receptor activity
copper ion binding
protein binding
electron carrier activity
methylated histone binding
oligosaccharide binding