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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89646528 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00559723_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
AF281063.1 AAG01448.1
AK302055.1
BC010000.2 AAH10000.2
BC132711.1
BC132713.1
BG480548.1
BT006841.1 AAP35487.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss AFG3L1P CHMP1A SPATA33 MC1R CDK10 GAS8 TCF25 LOC105371419 VPS9D1 VPS9D1-AS1 SPIRE2 FANCA DPEP1 LOC107984817 ZNF276 GAS8-AS1 CENPBD1 DEF8 TUBB3 SPATA2L DBNDD1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss AFG3L1P TUBB8P7 SPATA33 GAS8 CPNE7 ANKRD11 TCF25 LOC105371419 FANCA DPEP1 LOC107984817 LOC105371414 CENPBD1 DEF8 TUBB3 RPL13 LOC100287036 SPG7 DBNDD1 LOC101927817 CHMP1A MC1R CDK10 SNORD68 VPS9D1 URAHP VPS9D1-AS1 SPIRE2 PRDM7 ZNF276 GAS8-AS1 SPATA2L FAM157C ZNF778
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain DPEP1 CHMP1A SPATA33 CDK10 SPATA2L
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain DPEP1 LOC101927817 CHMP1A SPATA33 RPL13 CPNE7 ANKRD11 SNORD68 SPG7
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPATA33 ANKRD11 TCF25 CDT1 GALNS PABPN1L DPEP1 LOC107984817 LOC100129697 LOC107987238 LOC100289580 LOC101927817 CDK10 MIR4722 URAHP VPS9D1-AS1 SLC22A31 CBFA2T3 GAS8-AS1 CDH15 SNAI3-AS1 AFG3L1P TUBB8P7 LOC400558 GAS8 APRT CPNE7 LOC105371419 PIEZO1 MVD FANCA LOC105371414 LOC101927793 CENPBD1 DEF8 TUBB3 RPL13 LOC100287036 SPG7 DBNDD1 SNAI3 CHMP1A MC1R CYBA IL17C ACSF3 SNORD68 RNF166 VPS9D1 CTU2 SPIRE2 LOC339059 PRDM7 ZNF276 SPATA2L LINC00304 FAM157C ZNF778 TRAPPC2L LOC105371409
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CHMP1A SPATA33 CDK10 CPNE7 SNORD68 VPS9D1 VPS9D1-AS1 FANCA DPEP1 ZNF276 RPL13 SPATA2L SPG7
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain DPEP1 CHMP1A SPATA33 RPL13 CPNE7 SNORD68 SPG7

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