Hs00565989_cn

• Gene Symbol: GDE1
• Assay Reference Genome Location: Chr.16:19517142 on build GRCh38
• Cytoband: 16p12.3

Target Gene Details

• Entrez Gene ID: 51573
• Gene Name: glycerophosphodiester phosphodiesterase 1
• Gene Aliases: 363E6.2, MIR16
• Location: Chr.16:19501693-19522145 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GDE1	NM_001324066.1			NP_001310995.1
	NM_001324067.1	2	490	NP_001310996.1
	NM_016641.3	2	473	NP_057725.1
	NR_136689.1	2	490
	AF212862.1	2	429	AAF65234.1
	AF306698.1	2	382
	AK312912.1	2	443
	AY463154.1	2	309	AAR25624.1
	BC014981.1	2	364	AAH14981.1
	BC025273.1	2	424	AAH25273.1
	BQ897064.1	2	473

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833163	Chr.16:19457512 - 19628716 on Build GRCh38	Gain	CCP110 TMC5 C16orf62 GDE1
nsv571582	Chr.16:19038056 - 19790801 on Build GRCh38	Gain	CCP110 CLEC19A TMC5 C16orf62 IQCK ITPRIPL2 GDE1 KNOP1 COQ7 SYT17 LOC102723385 TMC7
nsv436835	Chr.16:18930652 - 21500976 on Build GRCh38	Insertion	SMG1P3 CLEC19A C16orf62 ZP2 IQCK ITPRIPL2 ACSM2A GDE1 LYRM1 NPIPB3 CRYM GPR139 TMEM159 CCP110 UMOD TMC5 ACSM3 ACSM2B CRYM-AS1 GP2 SNX29P1 PDILT GPRC5B KNOP1 DCUN1D3 ERI2 ACSM5 LOC81691 LOC100190986 ACSM1 DNAH3 ANKS4B COQ7 THUMPD1 SYT17 LOC102723385 TMC7

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

lipid metabolic process
glycerophospholipid catabolic process

Function(s)

glycerophosphodiester phosphodiesterase activity
metal ion binding
glycerophosphoinositol glycerophosphodiesterase activity