Hs00610994_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81245473 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	3861	NP_001033073.1
	XM_005257019.1	17	3979	XP_005257076.1
	XM_011524288.1	17	4000	XP_011522590.1
	XM_011524289.1	16	3976	XP_011522591.1
	XM_011524290.1	15	3255	XP_011522592.1
	AF086389.1
	BI194553.1	1	622

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	SLC38A10 TEPSIN C17orf89
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	OXLD1 SLC38A10 BAHCC1 TMEM105 MIR1250 MRPL12 LOC107985021 FAAP100 TEPSIN LOC101928855 ACTG1 C17orf89 CHMP6 RPTOR HGS MIR657 PDE6G LOC100129503 CEP131 LOC105371921 MIR6786 LINC00482 LOC100130370 AATK-AS1 MIR3065 BAIAP2-AS1 LOC107985022 MIR338 TSPAN10 FSCN2 SLC25A10 NPLOC4 LOC400627 LOC105371925 BAIAP2 MIR4740 AATK ARL16 MIR3186 CCDC137
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	OXLD1 GCGR NOTUM SLC38A10 TMEM105 FN3KRP MIR6787 ANAPC11 MIR4525 PPP1R27 RFNG CSNK1D DCXR RAB40B HGS LOC101929511 MCRIP1 CEP131 MIR6786 GPS1 TBCD SNORD134 AATK-AS1 TEX19 FASN CD7 TSPAN10 NPLOC4 MAFG-AS1 WDR45B LOC105371925 STRA13 CCDC57 NPB AATK ARL16 MIR3186 OGFOD3 CCDC137 BAHCC1 MYADML2 MRPL12 FAAP100 TEPSIN SIRT7 DUS1L ACTG1 C17orf89 SLC16A3 ASPSCR1 PDE6G LOC101929552 PCYT2 LOC105376791 ALYREF B3GNTL1 MAFG LINC00482 RAC3 UTS2R SECTM1 LOC100130370 LRRC45 LOC105371944 FN3K FSCN2 SLC25A10 PYCR1 FOXK2 P4HB LOC105376790 MIR4740 HEXDC ZNF750 C17orf62 NARF ARHGDIA
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	SLC38A10 AATK-AS1 LOC105371925 TEPSIN CEP131 AATK C17orf89
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	SLC38A10 LOC105371925 TEPSIN CEP131 C17orf89
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	SLC38A10 AATK-AS1 TMEM105 MIR1250 TEPSIN MIR3065 BAIAP2-AS1 MIR338 C17orf89 MIR657 LOC105371925 BAIAP2 CEP131 AATK LINC00482
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	SLC38A10 TMEM105 TEPSIN C17orf89 LINC00482
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	SLC38A10 AATK-AS1 LOC105371925 TEPSIN CEP131 C17orf89
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	SLC38A10 LOC100130370 AATK-AS1 BAHCC1 TMEM105 FAAP100 TEPSIN ACTG1 C17orf89 FSCN2 NPLOC4 LOC105371925 MIR4740 CEP131 AATK MIR3186 LINC00482
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	SLC38A10 LOC105371925 TEPSIN C17orf89

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity