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Gene Symbol
GPSM3
Assay Reference Genome
Location

Chr.6:32191321 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00613268_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63940

Gene Name:

 G-protein signaling modulator 3

Gene Aliases:

 AGS4, C6orf9, G18, G18.1a, G18.1b, G18.2, NG1

Location:

 Chr.6:32190766-32195523 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GPSM3 NM_001276501.1 4 930 NP_001263430.1
NM_022107.2 8 901 NP_071390.1
AF155657.1 4 549 AAF67476.1
AJ243937.1 8 901 CAB51287.1
AK313922.1
BC018724.1 4 593 AAH18724.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PPT2-EGFL8 RNF5 ATF6B TNXB NOTCH4 AGPAT1 MIR6721 EGFL8 PBX2 LOC100507547 FKBPL AGER MIR6833 GPSM3 PPT2 PRRT1
nsv602109 Chr.6:32190542 - 32193653 on Build GRCh38 Loss GPSM3
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss RNF5 HCG23 C4B TNXB NOTCH4 MIR6721 TNXA HLA-DRB6 PBX2 FKBPL HLA-DRB1 AGER HLA-DQB2 HLA-DRB5 HLA-DQA2 HLA-DQB1 GPSM3 HLA-DQB1-AS1 PPT2 BTNL2 HLA-DQA1 PPT2-EGFL8 ATF6B LOC101929163 HLA-DRA C6orf10 AGPAT1 EGFL8 CYP21A2 LOC100507547 C4A CYP21A1P MIR6833 MIR3135B PRRT1
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss DXO CFB C4B HSPA1A NELFE MIR6721 PBX2 STK19 AGER HLA-DRB5 GPSM3 BTNL2 SNORD48 ATF6B HSPA1B NEU1 C2 C6orf10 EGFL8 MIR1236 C4A C6orf48 CYP21A1P PRRT1 RNF5 SNORD52 HCG23 TNXB NOTCH4 SKIV2L TNXA HLA-DRB6 C2-AS1 FKBPL HLA-DRB1 HLA-DQB1 HLA-DQB1-AS1 PPT2 HLA-DQA1 PPT2-EGFL8 SLC44A4 LOC101929163 HLA-DRA AGPAT1 EHMT2 ZBTB12 CYP21A2 LOC100507547 MIR6833
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss RNF5 DXO CFB C4B TNXB NOTCH4 NELFE SKIV2L MIR6721 TNXA C2-AS1 PBX2 STK19 FKBPL AGER GPSM3 PPT2 PPT2-EGFL8 ATF6B C2 AGPAT1 EGFL8 CYP21A2 LOC100507547 MIR1236 C4A CYP21A1P MIR6833 PRRT1
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G6C LTB DXO CFB NFKBIL1 C4B SNORD84 LST1 HSPA1A NELFE MIR6721 BAG6 TNF MSH5 DDX39B PBX2 ATP6V1G2-DDX39B STK19 AGER HLA-DRB5 LY6G6F GPSM3 APOM PRRC2A BTNL2 SNORD48 HCP5 ATF6B HSPA1B LY6G6D NEU1 MCCD1 C2 C6orf10 SAPCD1-AS1 EGFL8 SNORD117 MIR1236 CSNK2B C4A ATP6V1G2 AIF1 C6orf48 CYP21A1P MIR4646 LY6G6E PRRT1 HCG26 RNF5 SNORD52 HCG23 DDX39B-AS1 TNXB NOTCH4 SKIV2L VWA7 TNXA HLA-DRB6 MICB C2-AS1 LY6G5C SAPCD1 FKBPL HLA-DRB1 LTA VARS LOC100287329 CLIC1 PPT2 PPT2-EGFL8 SNORA38 SLC44A4 HSPA1L LY6G5B LOC101929163 LOC102725068 HLA-DRA MSH5-SAPCD1 NCR3 AGPAT1 ABHD16A MIR6832 EHMT2 ZBTB12 GPANK1 CYP21A2 LOC100507547 C6orf47 C6orf25 MIR6833 LSM2 DDAH2
nsv602105 Chr.6:32183666 - 32210123 on Build GRCh38 Loss PBX2 AGER NOTCH4 GPSM3
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LTB DXO NFKBIL1 C4B LST1 HSPA1A ZBTB9 NELFE MIR6721 PPP1R2P1 MSH5 PFDN6 DDX39B STK19 HLA-DQA2 LY6G6F GPSM3 APOM PRRC2A BTNL2 SNORD48 HCP5 NEU1 HLA-DMA C2 C6orf10 RGL2 RXRB CSNK2B ATP6V1G2 AIF1 C6orf48 MIR3135B MIR4646 LY6G6E RNF5 RPS18 SNORD52 HLA-DOA DDX39B-AS1 COL11A2 TNXA MICB HLA-DMB LY6G5C TAP2 HLA-DPB2 FKBPL HLA-DRB1 SYNGAP1 PPT2 TAPBP HLA-DQA1 PPT2-EGFL8 SLC44A4 HSPA1L PHF1 DAXX LOC102725068 NCR3 ABHD16A MIR6832 EHMT2 ZBTB12 CYP21A2 C6orf47 C6orf25 PSMB9 HSD17B8 KIFC1 LSM2 LY6G6C CFB SNORD84 BAG6 TNF PBX2 PSMB8 ATP6V1G2-DDX39B BRD2 AGER HLA-DQB2 HLA-DRB5 TAP1 HLA-DOB ATF6B PSMB8-AS1 HSPA1B LY6G6D MCCD1 WDR46 SAPCD1-AS1 EGFL8 SNORD117 MIR1236 CUTA C4A CYP21A1P B3GALT4 PRRT1 HCG26 RING1 HCG25 HCG23 TNXB NOTCH4 MIR6834 MIR6873 SKIV2L SLC39A7 VWA7 MIR219A1 HLA-DRB6 C2-AS1 SAPCD1 LTA VARS HLA-DQB1 HLA-DQB1-AS1 LOC100287329 CLIC1 MIR5004 SNORA38 LY6G5B LOC101929163 HLA-DRA MSH5-SAPCD1 AGPAT1 GPANK1 VPS52 HCG24 LOC100507547 LOC100294145 HLA-DPA1 MIR6833 DDAH2 ZBTB22 HLA-DPB1
dgv10486n54 Chr.6:32187671 - 32193653 on Build GRCh38 Loss PBX2 GPSM3
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PPT2-EGFL8 RNF5 ATF6B TNXB NOTCH4 AGPAT1 MIR6721 EGFL8 PBX2 LOC100507547 FKBPL AGER MIR6833 GPSM3 PPT2 PRRT1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LTB DXO NFKBIL1 C4B LST1 HSPA1A ZBTB9 NELFE MIR6721 PPP1R2P1 MSH5 PFDN6 DDX39B STK19 HLA-DQA2 LY6G6F GPSM3 APOM PRRC2A BTNL2 SNORD48 HCP5 NEU1 HLA-DMA C2 C6orf10 RGL2 RXRB CSNK2B ATP6V1G2 AIF1 C6orf48 MIR3135B MIR4646 LY6G6E RNF5 RPS18 SNORD52 HLA-DOA DDX39B-AS1 COL11A2 TNXA MICB HLA-DMB LY6G5C TAP2 HLA-DPB2 FKBPL HLA-DRB1 SYNGAP1 PPT2 TAPBP HLA-DQA1 PPT2-EGFL8 SLC44A4 HSPA1L PHF1 DAXX LOC102725068 NCR3 ABHD16A MIR6832 EHMT2 ZBTB12 CYP21A2 C6orf47 C6orf25 PSMB9 HSD17B8 KIFC1 LSM2 LY6G6C CFB SNORD84 BAG6 TNF PBX2 PSMB8 ATP6V1G2-DDX39B BRD2 AGER HLA-DQB2 HLA-DRB5 TAP1 HLA-DOB ATF6B PSMB8-AS1 HSPA1B LY6G6D MCCD1 WDR46 SAPCD1-AS1 EGFL8 SNORD117 MIR1236 CUTA C4A CYP21A1P B3GALT4 PRRT1 HCG26 RING1 HCG25 HCG23 TNXB NOTCH4 MIR6834 MIR6873 SKIV2L SLC39A7 VWA7 MIR219A1 HLA-DRB6 C2-AS1 SAPCD1 LTA VARS HLA-DQB1 HLA-DQB1-AS1 LOC100287329 CLIC1 MIR5004 SNORA38 LY6G5B LOC101929163 HLA-DRA MSH5-SAPCD1 AGPAT1 GPANK1 VPS52 HCG24 LOC100507547 LOC100294145 HLA-DPA1 MIR6833 DDAH2 ZBTB22 HLA-DPB1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G6C LTB DXO CFB NFKBIL1 C4B SNORD84 LST1 HSPA1A NELFE MIR6721 BAG6 TNF MSH5 HLA-B DDX39B PBX2 ATP6V1G2-DDX39B STK19 AGER LY6G6F GPSM3 APOM PRRC2A BTNL2 SNORD48 HCP5 ATF6B HSPA1B LY6G6D NEU1 MIR6891 MCCD1 C2 C6orf10 SAPCD1-AS1 EGFL8 SNORD117 MIR1236 CSNK2B C4A ATP6V1G2 AIF1 C6orf48 CYP21A1P MIR4646 LY6G6E PRRT1 HCG26 RNF5 SNORD52 HCG23 DDX39B-AS1 TNXB NOTCH4 SKIV2L VWA7 TNXA MICB C2-AS1 LY6G5C SAPCD1 FKBPL LTA VARS LOC100287329 CLIC1 PPT2 PPT2-EGFL8 SNORA38 SLC44A4 HSPA1L LY6G5B LOC101929163 LOC102725068 HLA-DRA MSH5-SAPCD1 NCR3 AGPAT1 MICA ABHD16A MIR6832 EHMT2 ZBTB12 GPANK1 CYP21A2 LOC100507547 C6orf47 C6orf25 MIR6833 LSM2 DDAH2

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