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See other CLCN7 CNV Assays ›
Gene Symbol
CLCN7
Assay Reference Genome
Location

Chr.16:1445806 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00620221_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1186

Gene Name:

 chloride voltage-gated channel 7

Gene Aliases:

 CLC-7, CLC7, OPTA2, OPTB4, PPP1R63

Location:

 Chr.16:1444933-1475084 on Build GRCh38

Assay Gene Location:

 Within Exon 26
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLCN7 NM_001114331.2 24 3281 NP_001107803.1
NM_001287.5 25 3353 NP_001278.1
XM_011522354.1 25 3435 XP_011520656.1
AF224741.1 AAF34711.1
AK056551.1 24 3222
AK096963.1 7 2278
AK122944.1 25 3869
AK128285.1 9 3267
AK130196.1 3 1185
BC004946.1 8 1613 AAH04946.1
BC006158.1 14 2188 AAH06158.1
BC012737.2 25 3280 AAH12737.1
U88844.1 3 1016 AAB48530.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571161 Chr.16:1431019 - 1457987 on Build GRCh38 Gain LOC105371045 CLCN7 CCDC154
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain PTX4 LOC105371045 UNKL CLCN7 IFT140 TSR3 UBE2I GNPTG C16orf91 BAIAP3 CCDC154 TELO2
nsv471068 Chr.16:1439259 - 1460566 on Build GRCh38 Gain CLCN7 CCDC154
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FLJ42627 MIR3178 METRN ERVK13-1 HAGHL HBZ MCRIP2 TMEM204 WDR24 MIR4717 HBA1 NME4 WASIR2 CASKIN1 SNORA64 SSTR5-AS1 EME2 MIR6511B1 FAHD1 PTX4 PRR25 RGS11 HS3ST6 LOC100287175 TSR3 ATP6V0C NHLRC4 GNPTG C16orf91 TPSAB1 MIR3177 MRPL28 CAPN15 ECI1 TMEM8A TSC2 NARFL PKD1 RAB11FIP3 MSRB1 SNRNP25 LOC652276 TPSG1 POLR3K E4F1 FBXL16 RPS2 RAB40C TPSD1 MIR6767 MIR6768 RHOT2 DECR2 NOXO1 NME3 SNORA78 BAIAP3 MSLN HN1L LINC00235 LOC105371049 MIR3677 CEMP1 AMDHD2 PRSS29P CRAMP1 MIR1225 GNG13 SYNGR3 RHBDF1 TELO2 TBL3 HAGH MLST8 MAPK8IP3 JMJD8 UBE2I NTN3 LMF1-AS1 RNF151 CCDC154 MIR3176 WFIKKN1 DDX11L10 CHTF18 ARHGDIG IGFALS HBM NPRL3 ABCA3 LOC107987233 LOC105371047 MIR662 BRICD5 RAB26 RPL23AP5 STUB1 GFER PDPK1 C1QTNF8 RNPS1 MIR6859-4 LOC100134368 NTHL1 PRR35 CLCN7 PGP MIR3180-5 RHBDL1 NDUFB10 C16orf59 LMF1 PIGQ SLC9A3R2 DNASE1L2 ABCA17P RPL3L LOC105371046 MEIOB HBA2 TRAF7 TPSB2 HBQ1 SOX8 CACNA1H SNHG19 ZNF598 NUBP2 PRSS27 LOC105371045 MIR5587 FAM234A IFT140 CCNF SNORA10 FAM173A MRPS34 RPUSD1 NPW MPG AXIN1 MIR940 METTL26 LOC105371184 LOC107984876 LOC729652 LOC105371038 LOC101929280 KCTD5 LUC7L LOC106660606 SNORD60 PDIA2 CCDC78 WDR90 UNKL SSTR5 TBC1D24 MIR4516 SPSB3 SNHG9 LINC00254
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss TPSB2 SOX8 CACNA1H LOC107984876 UBE2I LMF1-AS1 BAIAP3 SSTR5-AS1 CCDC154 C1QTNF8 LOC105371045 UNKL SSTR5 CLCN7 PRSS29P TPSG1 TSR3 GNPTG C16orf91 TPSD1 TPSAB1 LMF1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion TPSB2 CACNA1H UBE2I BAIAP3 CCDC154 PTX4 LOC105371045 UNKL CLCN7 IFT140 PRSS29P TPSG1 TSR3 LOC105371047 TMEM204 GNPTG C16orf91 TPSD1 TPSAB1 TELO2
nsv817713 Chr.16:1426464 - 1460566 on Build GRCh38 Loss LOC105371045 CLCN7 CCDC154
nsv819844 Chr.16:1401518 - 1457987 on Build GRCh38 Gain LOC105371045 UNKL CLCN7 C16orf91 CCDC154

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