Hs00623612_cn

• Gene Symbol: RRP36
• Assay Reference Genome Location: Chr.6:43026050 on build GRCh38
• Cytoband: 6p21.1

Target Gene Details

• Entrez Gene ID: 88745
• Gene Name: ribosomal RNA processing 36
• Gene Aliases: C6orf153, dJ20C7.4
• Location: Chr.6:43021647-43029599 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RRP36	NM_033112.2			NP_149103.1
	AF161371.1			AAF28931.1
	AK313816.1
	BC006293.2			AAH06293.2
	BC011933.2			AAH11933.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv602992	Chr.6:42948182 - 43110718 on Build GRCh38	Loss	PEX6 CUL7 CNPY3-GNMT MRPL2 PPP2R5D KLHDC3 GNMT PTK7 RRP36 KLC4 MEA1
nsv1017398	Chr.6:42659705 - 43400998 on Build GRCh38	Gain	UBR2 KLHDC3 LOC401261 PTK7 GLTSCR1L PTCRA KLC4 C6orf226 PEX6 CUL7 CNPY3-GNMT PPP2R5D ATP6V0CP3 CNPY3 RRP36 MEA1 TTBK1 CRIP3 CUL9 DNPH1 ZNF318 TBCC PRPH2 RPL7L1 SLC22A7 SRF MRPL2 GNMT
dgv10640n54	Chr.6:43002769 - 43128461 on Build GRCh38	Loss	CUL7 MRPL2 PPP2R5D KLHDC3 PTK7 RRP36 KLC4 MEA1

More Information

Additional Information:

For this assay, SNP(s) [rs74538867] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cleavage involved in rRNA processing
rRNA processing
ribosomal small subunit biogenesis

Function(s)

poly(A) RNA binding