Genomic Map
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Target Gene Details
Entrez Gene ID: | 56344 |
Gene Name: | calcium binding protein 5 |
Gene Aliases: |
CABP3 |
Location: |
Chr.19:48029383-48048342 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CABP5 | XM_017026992.1 | 2 | 284 | XP_016882481.1 |
Target Gene Details
Entrez Gene ID: | 8605 |
Gene Name: | phospholipase A2 group IVC |
Gene Aliases: |
CPLA2-gamma |
Location: |
Chr.19:48047843-48111445 on Build GRCh38 |
Assay Gene Location: | Within Exon 21 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PLA2G4C | NM_001159322.1 | 17 | 2334 | NP_001152794.1 |
| NM_001159323.1 | 17 | 2408 | NP_001152795.1 | |
| NM_003706.2 | 17 | 2365 | NP_003697.2 | |
| XM_011527431.2 | 16 | 2904 | XP_011525733.1 | |
| XM_017027411.1 | 16 | 2947 | XP_016882900.1 | |
| XM_017027412.1 | 18 | 3387 | XP_016882901.1 | |
| XM_017027413.1 | 18 | 3430 | XP_016882902.1 | |
| AF058921.1 | 17 | 2276 | AAC32823.1 | |
| AF065214.1 | 17 | 2310 | AAC78835.1 | |
| AK022440.1 | 17 | 2338 | ||
| AK295400.1 | ||||
| AL050193.1 | 3 | 642 | CAB43312.3 | |
| BC063416.1 | 17 | 2348 | AAH63416.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 C19orf68
BSPH1
ELSPBP1
PLA2G4C
PLA2G4C-AS1
LIG1
CABP5
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
AKT1S1
RUVBL2
NUCB1-AS1
KDELR1
SNORD35B
PLEKHA4
BAX
LOC101059948
CGB7
SNAR-A9
ALDH16A1
MIR4750
CGB1
PTOV1-AS2
CGB3
TEAD2
SNAR-A10
MIR4749
SULT2B1
CCDC114
LOC101928295
FGF21
CA11
RASIP1
BSPH1
SNORD33
PLA2G4C
KCNJ14
CYTH2
TRPM4
LIG1
SNORD34
SEC1P
VRK3
DBP
PTOV1-AS1
FUT1
FLT3LG
CARD8
SNAR-A2
SNRNP70
CABP5
PRMT1
SNAR-C1
LOC105372430
RCN3
SNAR-D
GRWD1
RRAS
KCNA7
MIR6799
FUT2
SNAR-C5
SNAR-A4
CGB2
IL4I1
AP2A1
HRC
ZNF473
SPACA4
SCAF1
EMP3
MIR6800
FLJ26850
MIR4751
SNAR-A1
LIN7B
FTL
FAM83E
C19orf73
TSKS
CPT1C
MIR4324
SIGLEC16
IZUMO1
SPHK2
NOSIP
RPL18
PRR12
PRRG2
IRF3
SNAR-G2
ATF5
SLC6A16
MIR5088
DKKL1
SNAR-G1
SNAR-B2
ZNF114
SNAR-C2
FUZ
SLC17A7
SNAR-A13
MAMSTR
HSD17B14
CARD8-AS1
TBC1D17
LHB
CGB5
PTH2
NTF4
NTN5
SNORD35A
GRIN2D
NUP62
GFY
SNAR-A5
SNAR-A3
SNAR-A8
GYS1
SNAR-B1
SNAR-A6
SNAR-A7
SNAR-C3
MIR6798
TMEM143
MED25
CD37
DHDH
PLA2G4C-AS1
PIH1D1
FCGRT
LOC105447645
SNAR-C4
SNORD32A
BCAT2
RPS11
BCL2L12
PNKP
PTOV1
SNAR-A11
C19orf68
ADM5
LOC100287477
SNAR-A12
ELSPBP1
SYNGR4
NUCB1
CGB8
SNAR-A14
MIR150
PPFIA3
LMTK3
TULP2
CCDC155
RPL13A
SIGLEC11
PPP1R15A
|
| dgv3610n100 | Chr.19:48024325 - 48062810 on Build GRCh38 | Gain |
ELSPBP1
PLA2G4C
PLA2G4C-AS1
CABP5
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
GRIN2D
PLA2G4C
KDELR1
EMP3
LIG1
ZNF114
C19orf68
TMEM143
ELSPBP1
SYNGR4
PLA2G4C-AS1
CARD8
CARD8-AS1
CCDC114
CABP5
|
| nsv2516 | Chr.19:48046715 - 48080669 on Build GRCh38 | Insertion |
PLA2G4C
PLA2G4C-AS1
CABP5
|
| nsv1062163 | Chr.19:48040339 - 48075632 on Build GRCh38 | Gain |
PLA2G4C
PLA2G4C-AS1
CABP5
|
| nsv1058785 | Chr.19:48004749 - 48075632 on Build GRCh38 | Gain |
ELSPBP1
PLA2G4C
PLA2G4C-AS1
CABP5
|
| esv3893228 | Chr.19:48002211 - 48072851 on Build GRCh38 | Loss |
ELSPBP1
PLA2G4C
PLA2G4C-AS1
CABP5
|
| nsv1058622 | Chr.19:47798576 - 48077885 on Build GRCh38 | Gain |
SNAR-C1
SNAR-C4
BSPH1
PLA2G4C
SNAR-A3
LINC01595
SNAR-A1
CRX
SNAR-C3
SNAR-C5
SNAR-C2
SNAR-A12
ELSPBP1
SNAR-A13
PLA2G4C-AS1
TPRX1
SULT2A1
SNAR-A2
CABP5
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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