Name: [Hs00756593_cn] [NCKIPSD]
Creator: Thermo Fisher Scientific
Keywords: [NCKIPSD] Assay, [NCK interacting protein with SH3 domain] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	51517
Gene Name:	NCK interacting protein with SH3 domain
Gene Aliases:	AF3P21, DIP, DIP1, ORF1, SPIN90, VIP54, WASLBP, WISH
Location:	Chr.3:48663814-48685941 on Build GRCh38
Assay Gene Location:	Within Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NCKIPSD	NM_016453.3	5	957	NP_057537.1
	NM_184231.2	5	936	NP_909119.1
	XM_017006594.1	5	951	XP_016862083.1
	XM_017006595.1	5	944	XP_016862084.1
	XM_017006596.1	5	971	XP_016862085.1
	XM_017006597.1	5	715	XP_016862086.1
	XM_017006598.1	5	941	XP_016862087.1
	XM_017006599.1	5	977	XP_016862088.1
	XM_017006600.1	5	940	XP_016862089.1
	AF178432.1	5	925	AAF35985.1
	AF303581.1	5	896	AAK09094.1
	AJ242655.2	5	925	CAB65089.2
	AY453794.1	5	904	AAR83735.1
	BC016052.1	5	820	AAH16052.1
	BC026280.1	5	887	AAH26280.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834685	Chr.3:48527576 - 48708341 on Build GRCh38	Loss	UQCRC1 MIR6823 COL7A1 SNORA94 NCKIPSD CELSR3-AS1 TMEM89 UCN2 PFKFB4 CELSR3 MIR6824 SLC26A6 MIR711 IP6K2 MIR4793
nsv523981	Chr.3:48478880 - 48683607 on Build GRCh38	Loss	UQCRC1 MIR6823 COL7A1 SNORA94 NCKIPSD CELSR3-AS1 TMEM89 UCN2 PFKFB4 CELSR3 MIR6824 SLC26A6 MIR711 SHISA5 MIR4793
nsv590247	Chr.3:48624552 - 48764496 on Build GRCh38	Loss	MIR6824 SLC26A6 PRKAR2A IP6K2 NCKIPSD MIR4793 CELSR3-AS1 CELSR3
nsv590248	Chr.3:48679560 - 48690203 on Build GRCh38	Loss	IP6K2 NCKIPSD
nsv818138	Chr.3:48573492 - 48694054 on Build GRCh38	Gain	MIR6824 UQCRC1 SLC26A6 MIR711 IP6K2 COL7A1 SNORA94 NCKIPSD MIR4793 CELSR3-AS1 TMEM89 CELSR3
nsv590246	Chr.3:48590581 - 48683607 on Build GRCh38	Loss	MIR6824 UQCRC1 SLC26A6 COL7A1 SNORA94 NCKIPSD MIR4793 CELSR3-AS1 TMEM89 CELSR3