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See other BCAT2 CNV Assays ›
Gene Symbol
BCAT2
Assay Reference Genome
Location

Chr.19:48795326 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00772459_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 587

Gene Name:

 branched chain amino acid transaminase 2

Gene Aliases:

 BCAM, BCATM, BCT2, PP18

Location:

 Chr.19:48795062-48811063 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BCAT2 NM_001164773.1 9 1059 NP_001158245.1
NM_001190.3 11 1335 NP_001181.2
NM_001284325.1 12 1816 NP_001271254.1
AF268047.1 11 1284 AAK38368.1
AF268048.1 9 1008 AAK38369.1
AK093627.1 12 1793
AK223522.1 11 1324 BAD97242.1
BC001900.1 11 1292 AAH01900.1
BC004243.1 10 1241 AAH04243.2
BE139200.1 1 265
CA310873.1 1 282
CB049110.1 1 302
U62739.1 10 1255 AAB53087.1
U68418.1 11 1279 AAB67672.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss MIR6799 SEC1P SNAR-G2 SNAR-A3 FCGRT FLT3LG SLC17A7 MAMSTR ZNF473 IL4I1 CPT1C SNAR-C3 FUT1 IRF3 PRRG2 ALDH16A1 LIG1 PLA2G4C FAM83E NUCB1 PTOV1-AS2 NUCB1-AS1 LOC105372430 SNAR-A6 MED25 SNAR-A9 PRR12 AKT1S1 RASIP1 CYTH2 TRPM4 VRK3 PPP1R15A HSD17B14 SYNGR4 SNAR-A13 BCL2L12 RRAS PRMT1 FTL NTF4 DKKL1 SNAR-A11 GYS1 CGB2 CCDC155 GRIN2D SNAR-C2 CGB8 PIH1D1 SNAR-C1 FGF21 RPL13A MIR4750 ADM5 CA11 IZUMO1 SNAR-A7 SNAR-A10 MIR150 LOC101059948 CABP5 KCNA7 GRWD1 CARD8-AS1 NTN5 KCNJ14 SNORD34 PNKP KDELR1 SNAR-B1 MIR6800 SNAR-A14 PLEKHA4 PTH2 FUZ CCDC114 SPACA4 CGB5 SNORD35A ELSPBP1 SNAR-D MIR4324 DBP SNAR-A4 TBC1D17 C19orf73 RPS11 TMEM143 AP2A1 FLJ26850 GFY SIGLEC16 CGB1 SNAR-C4 SULT2B1 CGB7 C19orf68 FUT2 SNAR-A12 CGB3 RUVBL2 NUP62 RCN3 SNRNP70 MIR4751 PLA2G4C-AS1 LIN7B SNAR-G1 LOC100287477 NOSIP SNAR-A5 SLC6A16 EMP3 HRC TEAD2 SNORD35B MIR5088 PPFIA3 SNAR-A8 SNAR-A2 SNORD33 SNAR-C5 TULP2 DHDH SNAR-B2 CD37 MIR6798 BAX PTOV1 BSPH1 BCAT2 LMTK3 MIR4749 LHB SPHK2 CARD8 TSKS LOC101928295 PTOV1-AS1 RPL18 SNORD32A LOC105447645 SIGLEC11 ZNF114 SCAF1 ATF5 SNAR-A1
esv3644600 Chr.19:48793369 - 48795744 on Build GRCh38 Loss BCAT2
esv2677313 Chr.19:48793367 - 48795729 on Build GRCh38 Deletion BCAT2
nsv833855 Chr.19:48750098 - 48949781 on Build GRCh38 Loss TULP2 DHDH NUCB1 NUCB1-AS1 FGF21 FUT1 PPP1R15A PLEKHA4 BCAT2 HSD17B14

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