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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775620 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00779727_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 6 715 NP_001244299.1
XM_017023025.1 6 637 XP_016878514.1
XM_017023026.1 5 628 XP_016878515.1
AK074080.2 5 799 BAB84906.2
EF452422.1 6 715

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MRPS34 NUBP2 NME3 SPSB3 MIR3177 EME2 MAPK8IP3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR4516 LOC100287175 ABCA17P MIR662 NTN3 WDR90 FAHD1 RAB40C RPL3L EME2 SYNGR3 C1QTNF8 TSR3 PTX4 RPS2 LOC105371045 HBA1 TPSG1 FAM173A SOX8 NME4 MIR3177 TBC1D24 MEIOB MSRB1 MIR6511B1 SSTR5 E4F1 JMJD8 LOC105371046 HAGHL IFT140 ATP6V0C CRAMP1 RPUSD1 TELO2 NME3 LOC107984876 GFER CCNF NPW PIGQ LMF1-AS1 LMF1 SNHG9 KCTD5 TPSD1 POLR3K PDPK1 CCDC78 LINC00235 RNPS1 PDIA2 BAIAP3 UBE2I MIR6767 LOC105371184 FBXL16 PRSS29P RHOT2 ABCA3 SNORA64 SNRNP25 MCRIP2 RHBDL1 PRSS27 NARFL SLC9A3R2 ECI1 MIR3178 LINC00254 MIR3180-5 SNORD60 CASKIN1 GNG13 GNPTG RPL23AP5 LUC7L RNF151 NTHL1 ERVK13-1 LOC106660606 PKD1 WFIKKN1 HN1L METTL26 TMEM204 IGFALS RGS11 MIR3176 RAB26 TPSB2 METRN SNORA78 MIR6768 SNORA10 MIR1225 MPG TPSAB1 UNKL RHBDF1 PRR25 C16orf59 MSLN HBM MRPL28 NUBP2 HBZ HAGH PRR35 CLCN7 MIR6859-4 LOC729652 TMEM8A CACNA1H LOC107987233 TBL3 WDR24 HBA2 MIR940 FAM234A TSC2 MIR3677 CAPN15 LOC105371038 SNHG19 PGP ARHGDIG LOC105371049 MIR4717 NOXO1 FLJ42627 MRPS34 C16orf91 ZNF598 DECR2 STUB1 BRICD5 CHTF18 CEMP1 SPSB3 CCDC154 DNASE1L2 SSTR5-AS1 LOC100134368 MIR5587 LOC101929280 HS3ST6 AXIN1 MAPK8IP3 MLST8 WASIR2 LOC105371047 AMDHD2 DDX11L10 NHLRC4 RAB11FIP3 LOC652276 NDUFB10 HBQ1 TRAF7 NPRL3
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss MRPS34 IGFALS NUBP2 NME3 HAGH SPSB3 EME2 MAPK8IP3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MRPS34 IGFALS NUBP2 NME3 SPSB3 MIR3177 EME2 MAPK8IP3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MRPS34 IGFALS NUBP2 NME3 SPSB3 EME2 MAPK8IP3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss LOC105371046 IFT140 EME2 HN1L MAPK8IP3 CRAMP1 MRPS34 IGFALS NUBP2 NME3 HAGH SPSB3 MIR3177
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MRPS34 IGFALS NUBP2 NME3 SPSB3 EME2 MAPK8IP3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss LOC105371046 FAHD1 IFT140 EME2 HN1L MAPK8IP3 CRAMP1 TMEM204 MRPS34 IGFALS LOC105371047 NUBP2 TELO2 NME3 HAGH SPSB3 MIR3177 MEIOB
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MRPS34 IGFALS NUBP2 NME3 SPSB3 EME2 MAPK8IP3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MRPS34 NME3 SPSB3 EME2 MAPK8IP3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss FAHD1 EME2 HN1L MAPK8IP3 CRAMP1 MRPS34 IGFALS NUBP2 NME3 HAGH SPSB3 MIR3177 MEIOB
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MRPS34 IGFALS NUBP2 NME3 SPSB3 EME2 MAPK8IP3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MRPS34 IGFALS NUBP2 NME3 HAGH SPSB3 MIR3177 FAHD1 EME2 MAPK8IP3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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