Name: [Hs00788267_cn] [NCKIPSD]
Creator: Thermo Fisher Scientific
Keywords: [NCKIPSD] Assay, [NCK interacting protein with SH3 domain] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	51517
Gene Name:	NCK interacting protein with SH3 domain
Gene Aliases:	AF3P21, DIP, DIP1, ORF1, SPIN90, VIP54, WASLBP, WISH
Location:	Chr.3:48663814-48685941 on Build GRCh38
Assay Gene Location:	Within Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NCKIPSD	NM_016453.3	10	1787	NP_057537.1
	NM_184231.2	10	1766	NP_909119.1
	XM_017006594.1	10	1781	XP_016862083.1
	XM_017006595.1	10	1774	XP_016862084.1
	XM_017006596.1	10	1801	XP_016862085.1
	XM_017006597.1	10	1545	XP_016862086.1
	XM_017006598.1	10	1771	XP_016862087.1
	XM_017006599.1	10	1807	XP_016862088.1
	XM_017006600.1	10	1770	XP_016862089.1
	AF178432.1	10	1755	AAF35985.1
	AF303581.1	10	1726	AAK09094.1
	AJ242655.2	10	1755	CAB65089.2
	AK294151.1	3	321
	AY453794.1	10	1734	AAR83735.1
	BC016052.1	10	1650	AAH16052.1
	BC026280.1	10	1717	AAH26280.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834685	Chr.3:48527576 - 48708341 on Build GRCh38	Loss	SLC26A6 NCKIPSD MIR711 UQCRC1 IP6K2 PFKFB4 TMEM89 SNORA94 CELSR3-AS1 MIR6824 MIR6823 COL7A1 MIR4793 CELSR3 UCN2
nsv523981	Chr.3:48478880 - 48683607 on Build GRCh38	Loss	SLC26A6 NCKIPSD MIR711 UQCRC1 SHISA5 PFKFB4 TMEM89 SNORA94 CELSR3-AS1 MIR6824 MIR6823 COL7A1 MIR4793 CELSR3 UCN2
nsv590247	Chr.3:48624552 - 48764496 on Build GRCh38	Loss	CELSR3-AS1 SLC26A6 NCKIPSD MIR6824 MIR4793 IP6K2 CELSR3 PRKAR2A
nsv818138	Chr.3:48573492 - 48694054 on Build GRCh38	Gain	SNORA94 CELSR3-AS1 SLC26A6 NCKIPSD MIR6824 MIR711 UQCRC1 COL7A1 MIR4793 IP6K2 CELSR3 TMEM89
nsv590246	Chr.3:48590581 - 48683607 on Build GRCh38	Loss	SNORA94 CELSR3-AS1 SLC26A6 NCKIPSD MIR6824 UQCRC1 COL7A1 MIR4793 CELSR3 TMEM89