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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88805777 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00818552_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 5 794 NP_112190.2
AB053172.1 5 794 BAB61878.1
AF070552.1 3 335
AF321125.1 5 765 AAG45181.1
BC000137.2 5 756 AAH00137.2
BC008676.1 5 632 AAH08676.1
BC008860.2 5 687 AAH08860.2
BC009410.1 5 750 AAH09410.1
BC014202.2 1 55 AAH14202.2
BC021126.1 3 326
BC049205.1 3 398 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5313n54 Chr.16:88795879 - 88806103 on Build GRCh38 Loss CDT1
nsv573677 Chr.16:88764428 - 88805821 on Build GRCh38 Loss PIEZO1 CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LINC00304 ZNF778 APRT LOC339059 CBFA2T3 LOC107987238 ACSF3 LOC100129697 CTU2 LOC105371409 LOC101927793 SLC22A31 GALNS LOC400558 PIEZO1 MIR4722 PABPN1L TRAPPC2L CDT1 CDH15 LOC100289580
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LINC00304 APRT CBFA2T3 LOC107987238 ACSF3 LOC100129697 LOC105371409 LOC101927793 SLC22A31 GALNS LOC400558 PABPN1L TRAPPC2L CDT1 CDH15
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain GALNS PIEZO1 MIR4722 SNAI3-AS1 APRT LOC339059 SNAI3 CDT1 LOC107987238 RNF166 CTU2 LOC100289580
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LINC00304 ZNF778 APRT LOC339059 ANKRD11 LOC100287036 CBFA2T3 LOC107987238 ACSF3 LOC100129697 LOC105371409 LOC101927793 SLC22A31 GALNS LOC400558 PIEZO1 LOC105371414 PABPN1L TRAPPC2L CDT1 CDH15 LOC100289580
nsv471117 Chr.16:88805821 - 88838392 on Build GRCh38 Gain GALNS APRT CDT1 LOC107987238
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC105371409 LOC101927793 GALNS PABPN1L APRT TRAPPC2L CDT1 CBFA2T3 LOC107987238 LOC100129697
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss RPL13 FAM157C ZNF778 SNORD68 LOC100129697 LOC101927793 SPG7 SPIRE2 LOC107984817 LOC101927817 CHMP1A APRT CBFA2T3 ACSF3 CTU2 VPS9D1 GALNS URAHP LOC105371414 MIR4722 GAS8-AS1 CENPBD1 TRAPPC2L CDT1 DPEP1 LOC100289580 VPS9D1-AS1 LOC100287036 TUBB8P7 LOC105371419 LOC105371409 LOC400558 TUBB3 CPNE7 AFG3L1P ZNF276 FANCA PRDM7 LINC00304 SPATA33 SNAI3-AS1 MVD SPATA2L LOC339059 ANKRD11 DBNDD1 SNAI3 LOC107987238 MC1R CDK10 SLC22A31 PIEZO1 PABPN1L GAS8 RNF166 DEF8 CYBA TCF25 CDH15 IL17C
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss GALNS PIEZO1 APRT TRAPPC2L CDT1 LOC107987238
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC105371409 LOC101927793 GALNS PIEZO1 PABPN1L APRT TRAPPC2L CDT1 CBFA2T3 LOC107987238 LOC100129697
dgv5319n54 Chr.16:88804814 - 88809520 on Build GRCh38 Loss APRT CDT1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain LOC101927793 GALNS PIEZO1 PABPN1L APRT TRAPPC2L CDT1 CBFA2T3 LOC107987238
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain APRT LOC339059 CBFA2T3 LOC107987238 CTU2 LOC101927793 GALNS PIEZO1 MIR4722 PABPN1L TRAPPC2L CDT1 LOC100289580

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