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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144040454 on build GRCh38
Cytoband
8q24.3
Assay ID Hs00864516_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 NP_001127846.1
NM_198572.2 NP_940974.2
XM_011517021.1 XP_011515323.1
XM_011517022.2 XP_011515324.1
XM_011517023.2 XP_011515325.1
XM_011517024.2 XP_011515326.1
XM_011517025.2 XP_011515327.1
XM_017013399.1 XP_016868888.1
AB092352.1 BAD08232.1
AK301710.1
BC050390.1 AAH50390.1
BC053547.1 AAH53547.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss CYC1 SPATC1 OPLAH MROH1 SMPD5 MIR6847 MAF1 EXOSC4 WDR97 SHARPIN GPAA1 MIR6846 HGH1
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss CPSF1 ADCK5 MIR6848 SPATC1 OPLAH MROH1 SLC39A4 VPS28 SMPD5 BOP1 MIR6847 KIFC2 TMEM249 MIR6893 LRRC14 MAF1 RECQL4 TONSL LOC101928902 MIR1234 EXOSC4 MIR6849 SHARPIN FBXL6 GPAA1 MIR6846 HGH1 CYC1 SCX PPP1R16A SLC52A2 GPT FOXH1 MFSD3 CYHR1 HSF1 LOC101928953 GRINA PARP10 DGAT1 PLEC TONSL-AS1 MIR7112 MIR939 WDR97 MIR661 SCRT1
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SPATC1 SMPD5
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss CPSF1 ADCK5 MIR6848 SPATC1 OPLAH MROH1 SLC39A4 VPS28 SMPD5 BOP1 MIR6847 KIFC2 TMEM249 MIR6893 LRRC14 MAF1 RECQL4 TONSL LOC101928902 MIR1234 EXOSC4 MIR6849 SHARPIN FBXL6 GPAA1 MIR6846 HGH1 CYC1 SCX PPP1R16A SLC52A2 GPT FOXH1 MFSD3 CYHR1 HSF1 LOC101928953 GRINA PARP10 DGAT1 PLEC TONSL-AS1 MIR7112 MIR939 WDR97 MIR661 SCRT1
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss CYC1 SPATC1 OPLAH SMPD5 MIR6847 GRINA PARP10 MAF1 PLEC EXOSC4 WDR97 SHARPIN GPAA1 MIR6846
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss CYC1 SPATC1 OPLAH MROH1 SMPD5 MIR6847 GRINA PARP10 MAF1 PLEC EXOSC4 WDR97 SHARPIN MIR661 GPAA1 EPPK1 MIR6846 HGH1
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion CYC1 SPATC1 OPLAH SMPD5 MIR6847 GRINA PARP10 MAF1 PLEC EXOSC4 WDR97 SHARPIN MIR661 GPAA1 EPPK1 MIR6846
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR937 SPATC1 OPLAH SCRIB LOC642574 PUF60 SMPD5 MIR6847 GRINA PARP10 PLEC MIR6845 EXOSC4 MIR661 EPPK1 NRBP2 MIR6846
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain CYC1 PARP10 PLEC SPATC1 OPLAH EXOSC4 SMPD5 MIR661 GPAA1 MIR6847 MIR6846 GRINA
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain CYC1 SPATC1 OPLAH SMPD5 MIR6847 GRINA PARP10 MAF1 PLEC EXOSC4 WDR97 SHARPIN MIR661 GPAA1 MIR6846
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss PARP10 PLEC SPATC1 OPLAH EXOSC4 SMPD5 MIR661 GPAA1 MIR6847 MIR6846 GRINA

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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