Hs00878481_cn

• Gene Symbol: CCDC18
• Assay Reference Genome Location: Chr.1:93186381 on build GRCh38
• Cytoband: 1p22.1

Target Gene Details

• Entrez Gene ID: 343099
• Gene Name: coiled-coil domain containing 18
• Gene Aliases: NY-SAR-41
• Location: Chr.1:93179802-93279037 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCDC18	NM_001306076.1	4	509	NP_001293005.1
	NM_206886.4	4	509	NP_996769.3
	XM_011541361.2	4	718	XP_011539663.2
	XM_011541372.2	4	718	XP_011539674.2
	XM_017001154.1	4	718	XP_016856643.1
	XM_017001155.1	4	718	XP_016856644.1
	XM_017001156.1	4	688	XP_016856645.1
	XM_017001157.1	4	718	XP_016856646.1
	XM_017001158.1	4	718	XP_016856647.1
	XM_017001159.1	4	718	XP_016856648.1
	XM_017001160.1	4	718	XP_016856649.1
	XM_017001161.1	4	718	XP_016856650.1
	XM_017001162.1	4	431	XP_016856651.1
	XM_017001163.1	4	985	XP_016856652.1
	XM_017001164.1	4	529	XP_016856653.1
	XM_017001165.1	4	718	XP_016856654.1
	XM_017001166.1	2	173	XP_016856655.1
	XM_017001167.1	2	108	XP_016856656.1
	XM_017001168.1			XP_016856657.1
	XM_017001169.1	4	718	XP_016856658.1
	BC056667.1	4	505	AAH56667.1
	BX099893.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830625	Chr.1:93100821 - 93269689 on Build GRCh38	Loss	MTF2 TMED5 CCDC18
nsv830614	Chr.1:93000421 - 93213143 on Build GRCh38	Loss	MTF2 TMED5 CCDC18

More Information

Additional Information:

For this assay, SNP(s) [rs74596359] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cytoskeletal protein