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See other PUF60 CNV Assays ›
Gene Symbol
PUF60
Assay Reference Genome
Location

Chr.8:143816567 on build GRCh38
Cytoband
8q24.3
Assay ID Hs00879966_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22827

Gene Name:

 poly(U) binding splicing factor 60

Gene Aliases:

 FIR, RoBPI, SIAHBP1, VRJS

Location:

 Chr.8:143816344-143829386 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUF60 NM_001136033.2 12 1735 NP_001129505.1
NM_001271096.1 11 1662 NP_001258025.1
NM_001271097.1 10 1578 NP_001258026.1
NM_001271098.1 12 1713 NP_001258027.1
NM_001271099.1 11 1629 NP_001258028.1
NM_001271100.1 11 1684 NP_001258029.1
NM_014281.4 11 1665 NP_055096.2
NM_078480.2 12 1716 NP_510965.1
XM_011516929.2 13 1915 XP_011515231.1
XM_011516930.2 12 1766 XP_011515232.1
XM_017013234.1 12 3248 XP_016868723.1
XM_017013235.1 12 1818 XP_016868724.1
XM_017013236.1 11 3197 XP_016868725.1
XM_017013237.1 13 1977 XP_016868726.1
XM_017013238.1 13 1777 XP_016868727.1
XM_017013239.1 12 1743 XP_016868728.1
XM_017013240.1 11 1692 XP_016868729.1
AF114818.1 12 1697 AAF23589.1
AF190744.1 12 1625 AAF05605.1
AF217197.2 11 1592 AAF27522.2
AK292373.1 12 1697
AW249619.1 1 233
BC008875.2 11 1631 AAH08875.1
BC009734.1 11 1614 AAH09734.1
BC011265.1 12 1652 AAH11265.1
BC011979.1 10 1531 AAH11979.1
CR457143.1 12 1633 CAG33424.1
U51586.1 10 1579 AAB41656.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv6442 Chr.8:143781830 - 143826293 on Build GRCh38 Deletion MIR937 PUF60 LOC642574 SCRIB
nsv950014 Chr.8:143786431 - 143842128 on Build GRCh38 Deletion MIR937 NRBP2 PUF60 LOC642574 SCRIB MIR6845
nsv612896 Chr.8:143778707 - 143874693 on Build GRCh38 Loss MIR937 NRBP2 PUF60 LOC642574 SCRIB EPPK1 MIR6845
nsv612895 Chr.8:143719073 - 143827718 on Build GRCh38 Loss MIR937 PUF60 LOC642574 SCRIB FAM83H LOC105375800 MIR4664 FAM83H-AS1 MAPK15
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR937 SPATC1 NRBP2 LOC642574 SCRIB EXOSC4 PARP10 PLEC GRINA MIR6845 PUF60 MIR6846 MIR6847 SMPD5 EPPK1 MIR661 OPLAH
nsv466009 Chr.8:143812326 - 143900795 on Build GRCh38 Loss MIR937 NRBP2 PUF60 SCRIB EPPK1 MIR6845

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