Hs00884502_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41574991 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3	4	855	NP_055275.1
	AB027011.1	3	578	BAA84704.1
	AL834417.1	4	740	CAD39079.2
	CR456457.1	3	590	CAG30343.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	ACO2 LOC100996598 TEF MIR6889 CSDC2 ZC3H7B TOB2 PMM1 PHF5A RANGAP1 LOC105373044 POLR3H
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	XRCC6 DESI1 CSDC2 PMM1 LOC105373044 POLR3H
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	XRCC6 MEI1 DESI1 CSDC2 PMM1 C22orf46 SNU13
nsv3639	Chr.22:41571809 - 41602871 on Build GRCh38	Insertion	DESI1 CSDC2 PMM1
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	ACO2 MIR6889 SNORD140 MEI1 TOB2 PMM1 PHF5A CHADL C22orf46 LOC105373044 SNU13 LOC100996598 TEF XRCC6 DESI1 CSDC2 ZC3H7B RANGAP1 EP300 EP300-AS1 MIR1281 POLR3H L3MBTL2
esv3647800	Chr.22:41574227 - 41593225 on Build GRCh38	Gain	CSDC2 PMM1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding