Hs00915098_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48030325 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	886	NP_062829.1
	XM_017026992.1	8	1087	XP_016882481.1
	AF169159.1	6	879	AAF25793.1
	BC126133.1	6	794
	BC126135.1	6	794
	BQ185108.1	1	390

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	BSPH1 PLA2G4C-AS1 ELSPBP1 LIG1 PLA2G4C C19orf68 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	LIN7B MIR5088 NOSIP GYS1 IRF3 PRMT1 SNAR-A13 PTH2 FGF21 CARD8 SNAR-C1 NTF4 ZNF473 FAM83E LMTK3 CGB1 ELSPBP1 KCNA7 SNAR-C5 PRRG2 SNAR-A6 MIR4324 FTL MIR6800 DHDH CYTH2 NUCB1 SIGLEC11 SNAR-C4 RASIP1 SNAR-D LOC105447645 GRWD1 PTOV1-AS2 IZUMO1 SNAR-G2 SPACA4 GRIN2D TBC1D17 TRPM4 RPL13A ATF5 RPL18 SNAR-B1 MIR4749 RRAS C19orf68 SNAR-A14 ZNF114 SNAR-A12 SNAR-A1 TULP2 PLA2G4C-AS1 MIR6799 SYNGR4 SNAR-A9 KDELR1 NTN5 TMEM143 DBP SEC1P NUCB1-AS1 BSPH1 LHB EMP3 LOC101059948 CA11 KCNJ14 FCGRT SIGLEC16 SNAR-G1 CPT1C MIR6798 SNRNP70 MIR150 PLEKHA4 PTOV1-AS1 HSD17B14 SULT2B1 CGB7 RUVBL2 CGB5 FUZ LIG1 GFY PNKP LOC101928295 PIH1D1 SLC6A16 DKKL1 MIR4751 CGB8 MED25 SNAR-A5 AP2A1 MIR4750 SNAR-A4 VRK3 MAMSTR SNORD32A SLC17A7 FLJ26850 SNAR-C2 CGB3 RPS11 SPHK2 PTOV1 SCAF1 AKT1S1 SNORD33 SNAR-C3 CABP5 FUT2 LOC105372430 SNAR-A8 BAX CGB2 BCAT2 ADM5 SNORD35A PPFIA3 TSKS SNAR-A3 FLT3LG SNAR-A2 SNORD35B PLA2G4C CCDC155 NUP62 SNAR-A10 ALDH16A1 IL4I1 CCDC114 FUT1 TEAD2 CD37 BCL2L12 HRC PPP1R15A LOC100287477 SNAR-B2 SNAR-A11 C19orf73 RCN3 SNORD34 CARD8-AS1 SNAR-A7 PRR12
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CCDC114 EMP3 LIG1 C19orf68 CARD8 ZNF114 PLA2G4C-AS1 SYNGR4 ELSPBP1 KDELR1 TMEM143 CARD8-AS1 PLA2G4C CABP5 GRIN2D
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	BSPH1 SNAR-A13 SNAR-C2 SNAR-C4 SULT2A1 SNAR-C1 SNAR-A12 SNAR-A1 TPRX1 CRX LINC01595 ELSPBP1 SNAR-C5 SNAR-A3 SNAR-A2 SNAR-C3 CABP5
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	BSPH1 SNAR-A13 SNAR-C2 SNAR-C4 SULT2A1 SNAR-C1 SNAR-A12 SNAR-A1 TPRX1 PLA2G4C-AS1 CRX LINC01595 ELSPBP1 SNAR-C5 SNAR-A3 SNAR-A2 PLA2G4C SNAR-C3 CABP5

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding