Hs00961808_cn

• Gene Symbol: PCED1A
• Assay Reference Genome Location: Chr.20:2840476 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 64773
• Gene Name: PC-esterase domain containing 1A
• Gene Aliases: C20orf81, FAM113A, bA12M19.1
• Location: Chr.20:2835314-2841243 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCED1A	NM_001271168.1			NP_001258097.1
	NM_022760.4	1	227	NP_073597.2
	XM_005260804.2			XP_005260861.1
	XM_005260805.2	1	160	XP_005260862.1
	XM_005260806.3	1	160	XP_005260863.1
	AK026029.1			BAB15328.1
	AK056353.1	1	211	BAB71160.1
	AK293638.1
	BC014247.2			AAH14247.1
	BC051816.1			AAH51816.1
	BE302577.1
	DB276752.1
	DC421675.1	1	227

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3645020	Chr.20:2816405 - 2926274 on Build GRCh38	Gain	TMEM239 PTPRA VPS16 PCED1A
nsv1057464	Chr.20:2650623 - 2989686 on Build GRCh38	Gain	TMEM239 C20orf141 SNORD110 SNORA51 CPXM1 SNORD57 PTPRA VPS16 PCED1A NOP56 MIR1292 IDH3B EBF4 SNORD86 SNORD56
nsv522009	Chr.20:2745032 - 3030542 on Build GRCh38	Gain	TMEM239 C20orf141 EBF4 CPXM1 PTPRA VPS16 PCED1A
nsv833895	Chr.20:2730164 - 2882236 on Build GRCh38	Loss	TMEM239 C20orf141 EBF4 CPXM1 PTPRA VPS16 PCED1A
nsv952978	Chr.20:2835355 - 2842754 on Build GRCh38	Deletion	VPS16 PCED1A
nsv3261	Chr.20:2820663 - 2851754 on Build GRCh38	Deletion	VPS16 PCED1A
esv2762056	Chr.20:2740745 - 2944353 on Build GRCh38	Gain	TMEM239 C20orf141 EBF4 CPXM1 PTPRA VPS16 PCED1A

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding