Hs00974328_cn

• Gene Symbol: YBX2
• Assay Reference Genome Location: Chr.17:7290559 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 51087
• Gene Name: Y-box binding protein 2
• Gene Aliases: CONTRIN, CSDA3, DBPC, MSY2
• Location: Chr.17:7288252-7294602 on Build GRCh38
• Assay Gene Location: Overlaps Intron 5 - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YBX2	NM_015982.3			NP_057066.2
	XM_017024713.1			XP_016880202.1
	AB208818.1			BAD92055.1
	AF096834.1			AAD30662.1
	AK092747.1
	AK315035.1
	BC033800.1			AAH33800.1
	BC047760.1			AAH47760.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	BCL6B FXR2 SAT2 DLG4 TNFSF12 EIF5A TNK1 SHBG MPDU1 DVL2 LOC100996842 SNORA67 ALOX12P2 YBX2 ASGR2 ALOX12-AS1 ACADVL PLSCR3 SOX15 SENP3 TMEM256-PLSCR3 SNORD10 MIR497 TMEM102 TMEM256 SLC2A4 ASGR1 ACAP1 PHF23 POLR2A SLC16A13 MIR324 C17orf49 EIF4A1 NLGN2 CLEC10A SLC35G6 SENP3-EIF4A1 FBXO39 ALOX12 CD68 CLDN7 GABARAP LOC107983988 C17orf74 SNORA48 KCTD11 TNFSF13 MIR497HG TNFSF12-TNFSF13 SLC16A11 RNASEK MIR195 NEURL4 SPEM1 TEKT1 RNASEK-C17orf49 TMEM95 ATP1B2 CTDNEP1 ZBTB4 GPS2 CHRNB1 ELP5 FGF11
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	NLGN2 DLG4 EIF5A TNK1 DVL2 CLDN7 GABARAP YBX2 LOC107983988 C17orf74 ACADVL PLSCR3 KCTD11 TMEM256-PLSCR3 TMEM102 TMEM256 NEURL4 SPEM1 SLC2A4 ASGR1 TMEM95 CTDNEP1 ACAP1 GPS2 PHF23 CHRNB1 MIR324 ELP5 FGF11
esv2665200	Chr.17:7091816 - 7333062 on Build GRCh38	Deletion	ACADVL DLG4 NEURL4 SLC2A4 EIF5A ASGR1 CTDNEP1 GPS2 DVL2 PHF23 CLDN7 GABARAP YBX2 ASGR2 MIR324 ELP5
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	BCL6B FXR2 SAT2 DLG4 TNFSF12 EIF5A TNK1 SHBG MPDU1 DVL2 LOC100996842 SNORA67 YBX2 ASGR2 ALOX12-AS1 ACADVL PLSCR3 SOX15 SENP3 TMEM256-PLSCR3 SNORD10 MIR497 TMEM102 TMEM256 SLC2A4 ASGR1 ACAP1 PHF23 WRAP53 POLR2A SLC16A13 MIR324 C17orf49 EIF4A1 NLGN2 CLEC10A SLC35G6 SENP3-EIF4A1 ALOX12 CD68 CLDN7 GABARAP LOC107983988 C17orf74 SNORA48 KCTD11 TNFSF13 MIR497HG TNFSF12-TNFSF13 SLC16A11 RNASEK MIR195 NEURL4 SPEM1 RNASEK-C17orf49 TMEM95 ATP1B2 CTDNEP1 ZBTB4 GPS2 TP53 CHRNB1 ELP5 FGF11
nsv1963	Chr.17:7244585 - 7333855 on Build GRCh38	Deletion	NEURL4 SLC2A4 EIF5A CTDNEP1 GPS2 CLDN7 YBX2 ELP5
esv3639863	Chr.17:7280422 - 7290803 on Build GRCh38	Loss	SLC2A4 YBX2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
translational attenuation
oocyte development

Function(s)

DNA binding
RNA binding