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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49645140 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00977860_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 4 - Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
AK024444.1
BC011662.2 AAH11662.2
BC053992.1 AAH53992.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRMT1 IRF3 RRAS NOSIP ADM5 MIR5088 PRR12 PRRG2 BCL2L12 SCAF1 CPT1C
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRMT1 IRF3 RRAS NOSIP ADM5 MIR5088 PRR12 PRRG2 BCL2L12 SCAF1 CPT1C
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss TULP2 SNAR-A1 MIR6798 ZNF114 SNAR-A12 SNAR-A10 LOC101928295 BCL2L12 CGB3 CYTH2 CGB5 LMTK3 CABP5 SNAR-A11 LOC100287477 SNAR-C5 DBP SNORD35B SNRNP70 CARD8-AS1 AP2A1 SPHK2 MIR4749 MIR4750 SNORD32A BCAT2 GFY LHB SIGLEC11 SNAR-B1 ZNF473 PRMT1 GYS1 FUT2 LOC105447645 SIGLEC16 PRRG2 NTN5 SNAR-G2 TEAD2 KCNA7 PTH2 C19orf73 ALDH16A1 PTOV1-AS1 FUT1 LOC101059948 IRF3 PLA2G4C-AS1 CGB7 CA11 GRWD1 TMEM143 PNKP DHDH PPP1R15A SNAR-C4 SNAR-A14 SNAR-A6 SNAR-G1 LOC105372430 SNAR-A7 NUCB1 MIR4751 SCAF1 SNAR-B2 CARD8 CGB2 SLC17A7 PIH1D1 SPACA4 NOSIP BSPH1 CGB1 ELSPBP1 SNAR-A2 LIG1 SNAR-C3 SNAR-C1 KCNJ14 EMP3 SNAR-A9 MAMSTR FTL FCGRT SNAR-A5 KDELR1 SULT2B1 CCDC155 SYNGR4 BAX PTOV1-AS2 AKT1S1 FAM83E SNORD33 MIR6799 SNAR-A8 DKKL1 LIN7B SNAR-A13 PRR12 RASIP1 SNAR-A4 ATF5 MIR4324 CGB8 IZUMO1 RPS11 FLJ26850 RPL18 GRIN2D MIR5088 RUVBL2 NTF4 RCN3 TRPM4 MIR6800 C19orf68 CPT1C SNORD34 TSKS PLA2G4C CD37 VRK3 RPL13A SEC1P FUZ PPFIA3 PLEKHA4 SNAR-A3 TBC1D17 NUCB1-AS1 FGF21 SNAR-D CCDC114 SLC6A16 IL4I1 HRC MIR150 FLT3LG RRAS ADM5 SNAR-C2 PTOV1 MED25 SNORD35A HSD17B14 NUP62
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain PRMT1 IRF3 RRAS ADM5 MIR5088 PRR12 BCL2L12 SCAF1 CPT1C
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion BCL2L12 PTOV1-AS1 CPT1C IRF3 TSKS PTOV1-AS2 AKT1S1 PNKP MIR6799 FUZ AP2A1 MIR4749 MIR4750 PRR12 TBC1D17 ATF5 MIR4751 SCAF1 IL4I1 PRMT1 RRAS NOSIP ADM5 MIR5088 PTOV1 PRRG2 MED25 NUP62 MIR6800
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRMT1 IRF3 RRAS NOSIP ADM5 MIR5088 PRR12 PRRG2 BCL2L12 SCAF1 CPT1C
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion BCL2L12 PTOV1-AS1 FCGRT CPT1C SNORD34 IRF3 TSKS SNORD35B SNORD33 RPL13A MIR6799 FUZ AP2A1 PRR12 SNORD32A SCAF1 PRMT1 MIR150 RPS11 RRAS NOSIP ADM5 MIR5088 PRRG2 MED25 RCN3 SNORD35A MIR6800
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRMT1 IRF3 RRAS NOSIP PRR12 PRRG2 BCL2L12 SCAF1
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

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