Name: [Hs00979767_cn] [ATP2A3]
Creator: Thermo Fisher Scientific
Keywords: [ATP2A3] Assay, [ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3] Assay

Genomic Map

LOADING...

×

Back To Top

Assay Details

Target Gene Details

Entrez Gene ID:	489
Gene Name:	ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
Gene Aliases:	SERCA3
Location:	Chr.17:3923869-3964464 on Build GRCh38
Assay Gene Location:	Within Exon 25

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ATP2A3	NM_005173.3	21	4280	NP_005164.2
	NM_174953.2	23	4439	NP_777613.1
	NM_174954.2	23	4426	NP_777614.1
	NM_174955.2	22	4368	NP_777615.1
	NM_174956.2	22	4381	NP_777616.1
	NM_174957.2	21	4277	NP_777617.1
	NM_174958.2	23	3787	NP_777618.1
	XM_011523885.1	22	4365	XP_011522187.1
	XM_011523888.2	22	4378	XP_011522190.1
	AA643105.1
	AF068221.1	11	2015	AAC24526.1
	Z69881.1	21	4113	CAA93737.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1065489	Chr.17:2631416 - 3948349 on Build GRCh38	Gain	ATP2A3 OR1G1 OR1A1 P2RX1 CLUH OR1D2 LOC101927911 MIR1253 OR1A2 OR1D5 MIR6776 OR3A4P OR3A1 ITGAE NCBP3 TAX1BP3 SHPK RAP1GAP2 CTNS OR1D4 LOC105371591 TRPV1 TRPV3 EMC6 PAFAH1B1 OR1E2 OR3A3 P2RX5 SPATA22 CCDC92B LOC105371592 P2RX5-TAX1BP3 OR1E1 GSG2 OR3A2 ASPA CAMKK1
nsv517834	Chr.17:3904738 - 3976854 on Build GRCh38	Loss	ATP2A3 P2RX1
nsv833343	Chr.17:3822173 - 3980223 on Build GRCh38	Loss	ATP2A3 P2RX1 NCBP3 CAMKK1
esv2761940	Chr.17:3767589 - 3997617 on Build GRCh38	Gain	ATP2A3 P2RX1 ITGAE NCBP3 CAMKK1
nsv952108	Chr.17:3917607 - 3956106 on Build GRCh38	Deletion	ATP2A3
nsv521340	Chr.17:3890009 - 3976854 on Build GRCh38	Gain	ATP2A3 P2RX1 CAMKK1
nsv526126	Chr.17:3860639 - 3993513 on Build GRCh38	Loss	ATP2A3 P2RX1 CAMKK1