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See other TMC4 CNV Assays ›
Gene Symbol
TMC4
Assay Reference Genome
Location

Chr.19:54171940 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01039955_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 147798

Gene Name:

 transmembrane channel like 4

Gene Aliases:

 -

Location:

 Chr.19:54160095-54173250 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMC4 NM_001145303.2 2 374 NP_001138775.2
NM_144686.3 2 356 NP_653287.2
XM_011526486.2 2 339 XP_011524788.1
AK314973.1 2 277
AY236492.1 2 373 AAP69870.1
AY263166.1 2 253 AAP78781.1
BC025323.1 2 263 AAH25323.1
BQ082417.1 2 266
DQ656026.2 2 202

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9751 Chr.19:54158885 - 54193528 on Build GRCh38 Gain MBOAT7 TMC4 LENG1 TSEN34
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss CNOT3 NDUFA3 MBOAT7 TMC4 TFPT LENG1 PRPF31
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion OSCAR CNOT3 NDUFA3 MBOAT7 TMC4 TFPT LENG1 TSEN34 PRPF31
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion FAM90A27P CACNG7 RPS9 DPRX CACNG6 NDUFA3 ZNF331 MIR520B LILRA5 MIR526A1 MIR512-2 MIR1283-2 TFPT MIR518A2 MIR519B MIR518A1 MIR523 MIR516B1 TMC4 MIR498 MIR525 LENG1 ZNF818P LILRB2 PRPF31 MIR521-1 MIR524 MIR520A MIR373 LILRB3 MIR520D MIR519A1 MIR516B2 MBOAT7 MIR517A MIR371B MIR518E MIR520E MIR517C MIR518C LILRB5 ZNF677 VN1R2 ZNF761 MIR517B BIRC8 LILRA6 MIR515-2 MYADM LOC284379 MIR519E MIR520H TSEN34 MIR520G MIR518F MIR526B MIR519A2 MIR520F MIR372 ZNF845 MIR519D NLRP12 PRKCG MIR515-1 LOC105372457 TARM1 MIR520C ZNF525 CACNG8 MIR522 MIR1323 MIR518B MIR512-1 MIR527 ZNF765 OSCAR MIR935 CNOT3 MIR371A TPM3P9 ZNF665 MIR4752 MIR526A2 ZNF813 MIR1283-1 MIR521-2 MIR516A2 MIR516A1 VN1R4 MIR518D MIR519C VSTM1
nsv510774 Chr.19:54158011 - 54269511 on Build GRCh38 Deletion LILRB3 RPS9 LILRA6 MBOAT7 TMC4 LENG1 LILRB5 TSEN34
esv2758771 Chr.19:54163847 - 54954956 on Build GRCh38 Gain+Loss LILRB1 LOC101928804 RPS9 LENG8 TTYH1 NCR1 KIR3DL2 LILRA5 KIR3DL1 NLRP7 KIR3DL3 CDC42EP5 LILRA4 TMC4 LENG8-AS1 MIR8061 LAIR2 LILRB2 KIR2DS4 LILRB3 MBOAT7 LILRA1 LOC102724300 LENG9 KIR2DL1 MIR4752 LILRA2 LILRB5 LILRB4 KIR3DX1 LILRA6 FCAR LAIR1 KIR2DL3 KIR2DL4 TSEN34 LILRP2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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