Hs01062335_cn

• Gene Symbol: CHAF1A
• Assay Reference Genome Location: Chr.19:4446380 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 10036
• Gene Name: chromatin assembly factor 1 subunit A
• Gene Aliases: CAF-1, CAF1, CAF1B, CAF1P150, P150
• Location: Chr.19:4402596-4448322 on Build GRCh38
• Assay Gene Location: Within Intron 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHAF1A	XM_011527605.2			XP_011525907.1

Target Gene Details

• Entrez Gene ID: 80700
• Gene Name: UBX domain protein 6
• Gene Aliases: UBXD1, UBXDC2
• Location: Chr.19:4445006-4458759 on Build GRCh38
• Assay Gene Location: Overlaps Intron 11 - Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
UBXN6	NM_001171091.1			NP_001164562.1
	NM_025241.2			NP_079517.1
	XM_017027325.1			XP_016882814.1
	AF272893.1			AAK13257.1
	AF272894.1			AAK13258.1
	AK090473.1	1	3225	BAC03454.1
	AL833695.1
	BC007414.2			AAH07414.2
	BC008288.1			AAH08288.1
	BC017113.1			AAH17113.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833720	Chr.19:4367721 - 4540556 on Build GRCh38	Loss	PLIN5 MIR4746 SH3GL1 CHAF1A LRG1 HDGFRP2 UBXN6 PLIN4
nsv833718	Chr.19:4221577 - 4480248 on Build GRCh38	Loss	STAP2 EBI3 CHAF1A TMIGD2 UBXN6 MPND MIR4746 SH3GL1 CCDC94 ANKRD24 FSD1 HDGFRP2 SHD

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

DNA replication
DNA repair
DNA replication-dependent nucleosome assembly
protein complex assembly
cell cycle
chromatin assembly
biological_process

Function(s)

chromatin binding
protein binding
identical protein binding
unfolded protein binding
chromo shadow domain binding
molecular_function