Hs01125266_cn

• Gene Symbol: DDX28
• Assay Reference Genome Location: Chr.16:68021429 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 55794
• Gene Name: DEAD-box helicase 28
• Gene Aliases: MDDX28
• Location: Chr.16:68021274-68023867 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX28	NM_018380.3	1	2439	NP_060850.2
	AK002144.1	1	2014	BAA92106.1
	BC024273.1	1	1781	AAH24273.1
	BM671594.1	1	172

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2666619	Chr.16:68003989 - 68045407 on Build GRCh38	Deletion	LOC100131303 DDX28 DUS2
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	EDC4 CTCF TMEM208 CARMIL2 THAP11 C16orf86 DPEP3 TPPP3 LRRC36 HSD11B2 SLC9A5 DDX28 PSKH1 ZDHHC1 PARD6A ACD TSNAXIP1 NOL3 NUTF2 DPEP2 FBXL8 PLEKHG4 KCTD19 FAM65A GFOD2 HSF4 CENPT RANBP10 LRRC29 SLC12A4 E2F4 NRN1L MIR328 ATP6V0D1 LOC100131303 ELMO3 EXOC3L1 AGRP LCAT LOC107984813 KIAA0895L TRADD CTRL LOC105369155 PSMB10 DUS2 FHOD1 ENKD1 LOC100505942
esv3638897	Chr.16:68004075 - 68045657 on Build GRCh38	Loss	LOC100131303 DDX28 DUS2
esv3638899	Chr.16:68008886 - 68035332 on Build GRCh38	Loss	LOC100131303 DDX28 DUS2
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	EDC4 CTCF TMEM208 CARMIL2 C16orf70 THAP11 C16orf86 DPEP3 TPPP3 LRRC36 HSD11B2 SLC9A5 DDX28 PSKH1 ZDHHC1 PARD6A ACD TSNAXIP1 NOL3 NUTF2 DPEP2 FBXL8 PLEKHG4 KCTD19 B3GNT9 FAM65A GFOD2 HSF4 CENPT RANBP10 LRRC29 SLC12A4 E2F4 NRN1L MIR328 ATP6V0D1 LOC100131303 ELMO3 EXOC3L1 AGRP LCAT LOC107984813 KIAA0895L TRADD CTRL LOC105369155 PSMB10 DUS2 FHOD1 ENKD1 LOC100505942

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

RNA secondary structure unwinding
mitochondrial large ribosomal subunit assembly

Function(s)

ATP-dependent RNA helicase activity
ATP binding
rRNA binding
poly(A) RNA binding