Hs01127498_cn

• Gene Symbol: USB1
• Assay Reference Genome Location: Chr.16:58018988 on build GRCh38
• Cytoband: 16q21

Target Gene Details

• Entrez Gene ID: 79650
• Gene Name: U6 snRNA biogenesis phosphodiesterase 1
• Gene Aliases: C16orf57, HVSL1, Mpn1, PN, hUsb1
• Location: Chr.16:57999600-58021623 on Build GRCh38
• Assay Gene Location: Overlaps Intron 8 - Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USB1	NM_001195302.1			NP_001182231.1
	NM_024598.3			NP_078874.2
	XM_005256144.3			XP_005256201.1
	XM_011523328.2			XP_011521630.1
	XM_011523329.2			XP_011521631.1
	AK023216.1			BAB14469.1
	AK126223.1
	AK293220.1
	AK298473.1
	AK303121.1
	BC004415.1			AAH04415.1
	BC006291.2			AAH06291.1
	BC007774.2			AAH07774.1
	BC021554.1			AAH21554.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1063386	Chr.16:57958821 - 58040306 on Build GRCh38	Gain	ZNF319 MMP15 USB1 CNGB1 TEPP
esv3638716	Chr.16:58011317 - 58046443 on Build GRCh38	Loss	MMP15 USB1
nsv572759	Chr.16:57972385 - 58040306 on Build GRCh38	Loss	ZNF319 MMP15 USB1 TEPP
dgv525e214	Chr.16:58007762 - 58046443 on Build GRCh38	Gain	MMP15 USB1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA processing
RNA splicing
U6 snRNA 3'-end processing
RNA phosphodiester bond hydrolysis, exonucleolytic

Function(s)

3'-5'-exoribonuclease activity