Genomic Map
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Target Gene Details
Entrez Gene ID: | 10362 |
Gene Name: | high mobility group 20B |
Gene Aliases: |
BRAF25, BRAF35, HMGX2, HMGXB2, PP7706, SMARCE1r, SOXL, pp8857 |
Location: |
Chr.19:3572938-3579083 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| HMG20B | NM_006339.2 | 5 | 472 | NP_006330.2 |
| XM_017026144.1 | 5 | 479 | XP_016881633.1 | |
| AF072165.1 | 2 | 378 | AAF76253.1 | |
| AF072836.1 | 2 | 116 | AAC26860.1 | |
| AF146223.1 | 4 | 414 | AAF66707.1 | |
| AF288679.1 | 4 | 404 | AAG01174.1 | |
| AF318366.1 | 3 | 1295 | AAL55873.1 | |
| AF331191.1 | 4 | 404 | AAG60060.1 | |
| AK090733.1 | 5 | 366 | BAC03510.1 | |
| AK289500.1 | 5 | 460 | ||
| AK314201.1 | 5 | 446 | ||
| AL355691.1 | 3 | 370 | ||
| AL355702.1 | ||||
| AL355703.1 | 4 | 416 | ||
| AL355709.1 | 4 | 414 | CAB90809.2 | |
| BC002552.2 | 5 | 462 | AAH02552.1 | |
| BC003505.1 | 5 | 460 | AAH03505.2 | |
| BC004408.1 | 4 | 410 | AAH04408.2 | |
| BC021585.1 | 3 | 374 | AAH21585.1 | |
| BI561304.1 | 5 | 485 | ||
| CR456754.1 | 2 | 98 | CAG33035.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv961165 | Chr.19:3567351 - 3579402 on Build GRCh38 | Duplication |
 HMG20B
|
| nsv953948 | Chr.19:3171703 - 3700002 on Build GRCh38 | Deletion |
C19orf71
SMIM24
PIP5K1C
FZR1
DOHH
CACTIN
NFIC
CACTIN-AS1
CELF5
TBXA2R
NCLN
MFSD12
GIPC3
S1PR4
HMG20B
|
| nsv833713 | Chr.19:3564423 - 3627361 on Build GRCh38 | Loss |
CACTIN-AS1
TBXA2R
GIPC3
HMG20B
CACTIN
|
| nsv470114 | Chr.19:3372516 - 3855979 on Build GRCh38 | Loss |
C19orf71
SMIM24
PIP5K1C
MATK
RAX2
FZR1
DOHH
APBA3
CACTIN
NFIC
MRPL54
TJP3
CACTIN-AS1
TBXA2R
MFSD12
GIPC3
HMG20B
ZFR2
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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