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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:538623 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01184802_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 NM_198075.3 NP_932341.1
XM_005252775.2 XP_005252832.1
XM_005252776.2 XP_005252833.1
XM_006718132.2 2 1006 XP_006718195.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 3 421 XP_016872656.1
XM_017017168.1 3 660 XP_016872657.1
AK024495.1 BAB15785.1
BC035937.1 AAH35937.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss CDHR5 MIR210 LOC143666 LOC101059906 PHRF1 LMNTD2 HRAS RASSF7 IRF7 MIR210HG LRRC56
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss MIR210 IFITM3 IFITM2 IFITM5 ANO9 IFITM1 PTDSS2 SIGIRR CDHR5 PGGHG B4GALNT4 LOC143666 RNH1 PKP3 LOC101059906 PHRF1 LMNTD2 HRAS RASSF7 IRF7 MIR210HG LRRC56
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion CDHR5 MIR210 LOC143666 LOC101059906 PHRF1 LMNTD2 SCT HRAS RASSF7 IRF7 MIR210HG LRRC56
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CRACR2B MIR210 TMEM80 POLR2L CEND1 MUC2 PTDSS2 EPS8L2 SCT CD151 SLC25A22 SNORA52 CDHR5 B4GALNT4 DRD4 TOLLIP TALDO1 PKP3 AP2A2 PHRF1 LMNTD2 HRAS MUC5B RASSF7 MIR210HG LOC101927503 CHID1 PANO1 TSPAN4 ANO9 PDDC1 MUC6 SIGIRR PIDD1 MIR6744 LOC171391 LOC143666 RNH1 LOC101059906 PNPLA2 DEAF1 RPLP2 MUC5AC IRF7 LRRC56
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CRACR2B MIR210 TMEM80 TOLLIP-AS1 POLR2L CEND1 MUC2 PTDSS2 EPS8L2 SCT CD151 SLC25A22 SNORA52 CDHR5 DRD4 TOLLIP TALDO1 AP2A2 PHRF1 LMNTD2 HRAS MUC5B RASSF7 MIR210HG LOC101927503 CHID1 PANO1 TSPAN4 ANO9 PDDC1 MUC6 SIGIRR PIDD1 MIR6744 LOC171391 LOC143666 RNH1 LOC101059906 PNPLA2 DEAF1 RPLP2 MUC5AC IRF7 LRRC56
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain MIR210 SCT CDHR5 LOC143666 DRD4 PHRF1 DEAF1 LMNTD2 HRAS RASSF7 IRF7 MIR210HG LRRC56
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain MIR210 PTDSS2 SCT CDHR5 LOC143666 DRD4 RNH1 LOC101059906 PHRF1 DEAF1 LMNTD2 HRAS RASSF7 IRF7 MIR210HG LRRC56
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CRACR2B MIR210 TMEM80 POLR2L CEND1 PTDSS2 EPS8L2 SCT CD151 SLC25A22 SNORA52 CDHR5 B4GALNT4 DRD4 TALDO1 PKP3 AP2A2 PHRF1 LMNTD2 HRAS RASSF7 MIR210HG CHID1 PANO1 TSPAN4 ANO9 PDDC1 SIGIRR PIDD1 LOC171391 LOC143666 RNH1 LOC101059906 PNPLA2 DEAF1 RPLP2 IRF7 LRRC56
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CRACR2B MIR210 TMEM80 POLR2L CEND1 PTDSS2 EPS8L2 SCT CD151 SLC25A22 SNORA52 CDHR5 DRD4 TALDO1 PHRF1 LMNTD2 HRAS RASSF7 MIR210HG CHID1 PANO1 TSPAN4 PDDC1 PIDD1 LOC171391 LOC143666 RNH1 LOC101059906 PNPLA2 DEAF1 RPLP2 IRF7 LRRC56
nsv552855 Chr.11:532923 - 545087 on Build GRCh38 Loss HRAS LRRC56

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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