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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:616656 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01187874_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 15 3380 NP_001165439.1
NM_021924.4 15 3398 NP_068743.2
NM_031264.3 14 2816 NP_112554.2
XM_006718253.3 15 3058 XP_006718316.1
XM_011520188.2 15 2965 XP_011518490.1
XM_011520189.2 15 2872 XP_011518491.1
XM_011520190.2 13 2631 XP_011518492.1
AA975851.1
AF258675.1 13 1967 AAG16732.1
AW137262.1 1 93
AY358368.1 15 3237 AAQ88734.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LOC101059906 RASSF7 IRF7 HRAS LOC143666 MIR210HG LRRC56 MIR210 SCT CDHR5 PHRF1 LMNTD2
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss DEAF1 IRF7 SCT CDHR5 DRD4 PHRF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TALDO1 RPLP2 RASSF7 PANO1 LOC171391 CHID1 TMEM80 MIR210HG LRRC56 MIR210 SCT SIGIRR SNORA52 DEAF1 LOC101059906 LOC101927503 IRF7 MUC5B PTDSS2 LOC143666 MUC2 TOLLIP-AS1 PHRF1 LMNTD2 TOLLIP PDDC1 CRACR2B TSPAN4 PNPLA2 SLC25A22 PIDD1 CEND1 MUC6 MIR6744 ANO9 HRAS CD151 MUC5AC RNH1 POLR2L CDHR5 DRD4 AP2A2 EPS8L2
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain RASSF7 MIR210HG LRRC56 MIR210 SCT DEAF1 IRF7 HRAS LOC143666 CDHR5 DRD4 PHRF1 LMNTD2
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain RASSF7 MIR210HG LRRC56 MIR210 SCT DEAF1 LOC101059906 IRF7 HRAS PTDSS2 LOC143666 RNH1 CDHR5 DRD4 PHRF1 LMNTD2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TALDO1 RPLP2 RASSF7 PANO1 LOC171391 CHID1 TMEM80 MIR210HG LRRC56 MIR210 B4GALNT4 SCT SIGIRR SNORA52 DEAF1 LOC101059906 IRF7 PTDSS2 LOC143666 PHRF1 LMNTD2 PDDC1 CRACR2B TSPAN4 PNPLA2 SLC25A22 PIDD1 CEND1 PKP3 ANO9 HRAS CD151 RNH1 POLR2L CDHR5 DRD4 AP2A2 EPS8L2
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TALDO1 RPLP2 RASSF7 PANO1 LOC171391 CHID1 TMEM80 MIR210HG LRRC56 MIR210 SCT SNORA52 DEAF1 LOC101059906 IRF7 PTDSS2 LOC143666 PHRF1 LMNTD2 PDDC1 CRACR2B TSPAN4 PNPLA2 SLC25A22 PIDD1 CEND1 HRAS CD151 RNH1 POLR2L CDHR5 DRD4 EPS8L2
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain RASSF7 IRF7 LOC143666 MIR210HG LRRC56 MIR210 CDHR5 PHRF1 LMNTD2
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 SCT CDHR5
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss DEAF1 RASSF7 IRF7 LOC143666 MIR210HG MIR210 SCT CDHR5 DRD4 PHRF1 LMNTD2
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss LOC101059906 RASSF7 IRF7 HRAS LOC143666 MIR210HG LRRC56 MIR210 CDHR5 PHRF1 LMNTD2
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM5 RASSF7 PGGHG PKP3 MIR210HG LRRC56 MIR210 B4GALNT4 SIGIRR IFITM2 ANO9 LOC101059906 IRF7 HRAS PTDSS2 LOC143666 RNH1 IFITM1 CDHR5 IFITM3 PHRF1 LMNTD2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TALDO1 RPLP2 RASSF7 PANO1 LOC171391 CHID1 TMEM80 MIR210HG LRRC56 MIR210 B4GALNT4 SCT SIGIRR SNORA52 DEAF1 LOC101059906 LOC101927503 IRF7 MUC5B PTDSS2 LOC143666 MUC2 PHRF1 LMNTD2 TOLLIP PDDC1 CRACR2B TSPAN4 PNPLA2 SLC25A22 PIDD1 CEND1 PKP3 MUC6 MIR6744 ANO9 HRAS CD151 MUC5AC RNH1 POLR2L CDHR5 DRD4 AP2A2 EPS8L2
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss DEAF1 IRF7 SCT CDHR5 DRD4 PHRF1
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss RASSF7 IRF7 LOC143666 MIR210HG MIR210 CDHR5 PHRF1 LMNTD2

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