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See other CHRNB1 CNV Assays ›
Gene Symbol
CHRNB1
Assay Reference Genome
Location

Chr.17:7455844 on build GRCh38
Cytoband
17p13.1
Assay ID Hs01232603_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1140

Gene Name:

 cholinergic receptor nicotinic beta 1 subunit

Gene Aliases:

 ACHRB, CHRNB, CMS1D, CMS2A, CMS2C, SCCMS

Location:

 Chr.17:7445087-7457613 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNB1 NM_000747.2 NP_000738.2
AK298938.1
AK308106.1
BC011371.1 AAH11371.1
BC023553.2 AAH23553.1
X14830.1 CAA32939.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422288 Chr.17:6789933 - 7646709 on Build GRCh38 Deletion ALOX12 ELP5 SPEM1 ATP1B2 ALOX12P2 MIR324 SNORD10 CLDN7 ACAP1 GPS2 SOX15 TMEM102 GABARAP ACADVL NEURL4 POLR2A TNFSF12 DLG4 ASGR1 RNASEK SLC16A13 SNORA67 EIF4A1 TMEM256-PLSCR3 EIF5A FGF11 RNASEK-C17orf49 YBX2 LOC100996842 SENP3-EIF4A1 TNFSF13 CHRNB1 CD68 CLEC10A TEKT1 PLSCR3 MIR497HG ASGR2 MIR195 BCL6B PHF23 KCTD11 SLC35G6 FXR2 TMEM95 LOC107983988 SENP3 MIR497 MPDU1 ALOX12-AS1 TMEM256 SAT2 SHBG TNK1 C17orf74 C17orf49 SLC2A4 SNORA48 TNFSF12-TNFSF13 SLC16A11 ZBTB4 FBXO39 NLGN2 DVL2 CTDNEP1
nsv523672 Chr.17:7379825 - 7549660 on Build GRCh38 Loss TMEM256 CHRNB1 SPEM1 TNK1 TMEM256-PLSCR3 C17orf74 TNFSF12-TNFSF13 PLSCR3 ZBTB4 TMEM102 FGF11 SLC35G6 LOC107983988 NLGN2 POLR2A TNFSF12
nsv952118 Chr.17:7174582 - 7456981 on Build GRCh38 Deletion ELP5 CHRNB1 SPEM1 MIR324 PLSCR3 CLDN7 ACAP1 GPS2 PHF23 KCTD11 TMEM102 GABARAP TMEM95 ACADVL LOC107983988 NEURL4 DLG4 ASGR1 TMEM256 TNK1 TMEM256-PLSCR3 C17orf74 SLC2A4 EIF5A FGF11 YBX2 NLGN2 DVL2 CTDNEP1
nsv574322 Chr.17:7010333 - 7689462 on Build GRCh38 Loss ALOX12 ELP5 SPEM1 ATP1B2 MIR324 SNORD10 CLDN7 ACAP1 GPS2 SOX15 TMEM102 GABARAP ACADVL NEURL4 POLR2A TNFSF12 DLG4 ASGR1 RNASEK SLC16A13 SNORA67 EIF4A1 TMEM256-PLSCR3 EIF5A FGF11 RNASEK-C17orf49 YBX2 LOC100996842 SENP3-EIF4A1 TNFSF13 WRAP53 CHRNB1 CD68 CLEC10A TP53 PLSCR3 MIR497HG ASGR2 MIR195 BCL6B PHF23 KCTD11 SLC35G6 FXR2 TMEM95 LOC107983988 SENP3 MIR497 MPDU1 ALOX12-AS1 TMEM256 SAT2 SHBG TNK1 C17orf74 C17orf49 SLC2A4 SNORA48 TNFSF12-TNFSF13 SLC16A11 ZBTB4 NLGN2 DVL2 CTDNEP1

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More Information


Additional Information:

For this assay, SNP(s) [rs76927517] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Function(s) Process(es)


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