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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89657608 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01234252_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
XM_011523098.1 XP_011521400.1
AF281063.1 AAG01448.1
AK302055.1
BC132711.1
BC132713.1
BG480548.1
BI826757.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
HY008690.1
HY089525.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss AFG3L1P VPS9D1 ZNF276 CENPBD1 GAS8 SPATA33 DEF8 LOC105371419 DBNDD1 TUBB3 CHMP1A CDK10 SPIRE2 TCF25 GAS8-AS1 FANCA MC1R DPEP1 LOC107984817 SPATA2L VPS9D1-AS1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss AFG3L1P VPS9D1 PRDM7 CENPBD1 LOC101927817 SNORD68 FAM157C GAS8 LOC105371414 DEF8 LOC105371419 TUBB3 CHMP1A CDK10 SPIRE2 TCF25 ANKRD11 GAS8-AS1 FANCA MC1R VPS9D1-AS1 ZNF276 LOC100287036 ZNF778 SPATA33 SPG7 DBNDD1 TUBB8P7 URAHP RPL13 CPNE7 DPEP1 LOC107984817 SPATA2L
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain CDK10 SPATA33 CHMP1A DPEP1 SPATA2L
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain LOC101927817 SNORD68 ANKRD11 SPATA33 SPG7 RPL13 CPNE7 CHMP1A DPEP1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss AFG3L1P CDH15 PRDM7 LOC101927817 SNORD68 FAM157C GAS8 LOC105371414 DEF8 TUBB3 RNF166 CDK10 SPIRE2 GAS8-AS1 LOC100289580 FANCA SLC22A31 MC1R LOC101927793 APRT PIEZO1 VPS9D1-AS1 SNAI3 ZNF276 LOC100287036 SPATA33 CTU2 SPG7 DBNDD1 MIR4722 URAHP SNAI3-AS1 RPL13 LOC107987238 DPEP1 LOC107984817 SPATA2L VPS9D1 CENPBD1 IL17C CBFA2T3 LOC105371419 CHMP1A CYBA LOC339059 LOC400558 TCF25 ANKRD11 LOC100129697 GALNS TRAPPC2L CDT1 PABPN1L ZNF778 ACSF3 TUBB8P7 LINC00304 CPNE7 MVD LOC105371409
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion VPS9D1 ZNF276 SNORD68 SPATA33 SPG7 CHMP1A CDK10 FANCA RPL13 CPNE7 DPEP1 SPATA2L VPS9D1-AS1
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain SNORD68 SPATA33 SPG7 RPL13 CPNE7 CHMP1A DPEP1

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