Hs01252127_cn

• Gene Symbol: CDH15
• Assay Reference Genome Location: Chr.16:89191363 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 1013
• Gene Name: cadherin 15
• Gene Aliases: CDH14, CDH3, CDHM, MCAD, MRD3
• Location: Chr.16:89171755-89195492 on Build GRCh38
• Assay Gene Location: Overlaps Intron 8 - Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH15	NM_004933.2			NP_004924.1
	BC008951.2			AAH08951.1
	D83542.1			BAA12012.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv952072	Chr.16:89032193 - 89201992 on Build GRCh38	Deletion	LOC400558 SLC22A31 CDH15 LINC00304 ACSF3
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	CBFA2T3 LOC400558 LOC100289580 CTU2 LOC339059 TRAPPC2L PABPN1L GALNS LOC107987238 LOC100129697 PIEZO1 LOC105371409 SLC22A31 LOC101927793 CDT1 CDH15 MIR4722 LINC00304 APRT ACSF3 ZNF778
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	CBFA2T3 LOC400558 TRAPPC2L PABPN1L GALNS LOC107987238 LOC100129697 LOC105371409 SLC22A31 LOC101927793 CDT1 CDH15 LINC00304 APRT ACSF3
nsv573724	Chr.16:89100686 - 89217401 on Build GRCh38	Loss	LOC400558 SLC22A31 CDH15 LINC00304 ACSF3 ZNF778
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	CBFA2T3 LOC400558 LOC100289580 LOC105371414 LOC100287036 LOC339059 TRAPPC2L PABPN1L GALNS LOC107987238 LOC100129697 PIEZO1 LOC105371409 SLC22A31 LOC101927793 CDT1 CDH15 LINC00304 APRT ACSF3 ZNF778 ANKRD11
nsv573729	Chr.16:89189723 - 89193067 on Build GRCh38	Loss	CDH15
dgv3066n100	Chr.16:89067685 - 89301626 on Build GRCh38	Gain	LOC400558 SLC22A31 LOC105371414 CDH15 LINC00304 ACSF3 ZNF778 ANKRD11
nsv1078407	Chr.16:89186791 - 89191492 on Build GRCh38	Duplication	CDH15
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	DPEP1 CBFA2T3 CTU2 CDK10 PABPN1L LOC100129697 URAHP MIR4722 GAS8 MVD ANKRD11 SNAI3 AFG3L1P LOC107984817 CYBA LOC100289580 TUBB8P7 SNAI3-AS1 SPATA33 CDT1 CDH15 LOC101927817 LINC00304 APRT RPL13 LOC400558 TUBB3 TCF25 CPNE7 ZNF276 GALNS SPG7 PIEZO1 SNORD68 IL17C LOC101927793 VPS9D1-AS1 LOC105371419 RNF166 MC1R FANCA ZNF778 GAS8-AS1 LOC105371414 LOC100287036 LOC339059 TRAPPC2L LOC107987238 VPS9D1 DEF8 SPATA2L CENPBD1 LOC105371409 FAM157C SLC22A31 PRDM7 ACSF3 DBNDD1 SPIRE2 CHMP1A
esv2763149	Chr.16:89179547 - 89368114 on Build GRCh38	Gain	SLC22A31 LOC105371414 LOC100287036 CDH15 ZNF778 ANKRD11
dgv5320n54	Chr.16:89114475 - 89197443 on Build GRCh38	Loss	LOC400558 SLC22A31 CDH15 LINC00304 ACSF3
nsv509638	Chr.16:89152681 - 89296203 on Build GRCh38	Insertion	LOC400558 SLC22A31 LOC105371414 CDH15 LINC00304 ACSF3 ZNF778 ANKRD11
nsv573727	Chr.16:89169527 - 89193067 on Build GRCh38	Loss	CDH15
nsv1141297	Chr.16:89182392 - 89191792 on Build GRCh38	Duplication	CDH15

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
adherens junction organization
positive regulation of muscle cell differentiation

Function(s)

calcium ion binding
protein binding