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See other IFT46 CNV Assays ›
Gene Symbol
IFT46
Assay Reference Genome
Location

Chr.11:118544623 on build GRCh38
Cytoband
11q23.3
Assay ID Hs01317765_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 56912

Gene Name:

 intraflagellar transport 46

Gene Aliases:

 C11orf2, C11orf60, CFAP32

Location:

 Chr.11:118544528-118575624 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IFT46 NM_001168618.1 12 1627 NP_001162089.1
NM_020153.3 13 1780 NP_064538.3
XM_011542905.2 13 4522 XP_011541207.1
XM_011542906.2 12 4364 XP_011541208.1
XM_017018017.1 12 1519 XP_016873506.1
XM_017018018.1 11 1490 XP_016873507.1
AJ249980.1 12 1554 CAB96537.1
AK025480.1 13 1739 BAB15146.1
AK289521.1 12 1478
AL136934.1 12 1462 CAB66868.1
BC011647.2 12 1465 AAH11647.1
BC012802.2 12 1558 AAH12802.1
BC022856.1 12 1588 AAH22856.1

Target Gene Details

Entrez Gene ID:

 84866

Gene Name:

 transmembrane protein 25

Gene Aliases:

 -

Location:

 Chr.11:118531088-118546670 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMEM25 NM_001144037.1 NP_001137509.1
NM_001144038.1 NP_001137510.1
XM_017018431.1 XP_016873920.1
AK027305.1 BAB55029.1
AK075437.1 BAC11620.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1044281 Chr.11:118503814 - 118554704 on Build GRCh38 Gain LOC101929089 TMEM25 TTC36 KMT2A IFT46

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More Information


Additional Information:

For this assay, SNP(s) [rs112051935] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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