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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141182707 on build GRCh38
Cytoband
5q31.3
Assay ID Hs01321615_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 1018 NP_066008.2
AB046841.1 1 1309
AF217757.1 1 148 AAF81914.1
AK056460.1 1 323
AY013878.1 1 148 AAK21988.1
BC036062.1 1 297 AAH36062.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB11 PCDHB10 PCDHB12 PCDHB16 PCDHB9
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain PCDHB18P PCDHB3 PCDHB8 PCDHGB4 PCDHA11 PCDHGA9 PCDHGA10 PCDHGB8P PCDHGA1 PCDHGB5 PCDHGB7 PCDHB13 PCDHA5 PCDHB9 PCDHA6 PCDHGA4 PCDHGB1 PCDHA10 PCDHB1 PCDHB7 PCDHB15 PCDHA1 PCDHB17P PCDHGA11 PCDHGA6 PCDHB5 PCDHB4 PCDHB11 PCDHGB2 PCDHGB3 PCDHGA5 PCDHA7 PCDHGA3 PCDHB10 PCDHB14 PCDHB2 PCDHGA2 PCDHA2 PCDHA3 PCDHB16 PCDHB19P PCDHB6 PCDHGA7 PCDHA9 PCDHAC2 PCDHB12 TAF7 PCDHGB6 PCDHAC1 PCDHA12 PCDHA8 LOC101926905 SLC25A2 PCDHA4 PCDHA13 PCDHGA8 PCDHGA12
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB8 PCDHB11 PCDHB10 PCDHB16 PCDHB9
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB8 PCDHB10 PCDHB7 PCDHB16 PCDHB9
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB8 PCDHB11 PCDHB10 PCDHB13 PCDHB7 PCDHB14 PCDHB12 PCDHB16 PCDHB9 PCDHB17P
nsv1024594 Chr.5:141167591 - 141243953 on Build GRCh38 Loss PCDHB18P PCDHB8 PCDHB11 PCDHB10 PCDHB13 PCDHB7 PCDHB14 PCDHB12 PCDHB16 PCDHB9 PCDHB19P
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB8 PCDHB7 PCDHB16 PCDHB9 PCDHB17P
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB18P PCDHB8 PCDHB10 PCDHB7 PCDHB14 PCDHB15 PCDHB12 PCDHB17P PCDHB5 PCDHB4 PCDHB11 PCDHB13 PCDHB16 PCDHB9 PCDHB19P PCDHB6
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss PCDHB18P PCDHB3 PCDHB8 PCDHB10 PCDHB1 PCDHB7 PCDHB14 PCDHB15 PCDHB12 PCDHB2 PCDHB17P PCDHB5 TAF7 PCDHB4 PCDHB11 PCDHB13 LOC101926905 SLC25A2 PCDHB16 PCDHB9 PCDHB19P PCDHB6
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB8 PCDHB11 PCDHB10 PCDHB12 PCDHB16 PCDHB9
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB8 PCDHB11 PCDHB10 PCDHB13 PCDHB7 PCDHB12 PCDHB16 PCDHB9
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB18P PCDHB8 PCDHB10 PCDHB7 PCDHB14 PCDHB15 PCDHB12 PCDHB17P PCDHB11 PCDHB13 PCDHB16 PCDHB9 PCDHB19P PCDHB6

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