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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1298070 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01330846_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 ACAP3 SCNN1D MIR6726
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss UBE2J2 ACAP3 SDF4 SCNN1D B3GALT6 FAM132A MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MTND1P23 LOC100288069 SLC35E2 LOC107985729 SCNN1D CCNL2 FNDC10 ATAD3A LOC105378948 LOC100134822 OR4F29 LINC01342 LOC102725121 LOC102724312 MORN1 LOC100506504 TMEM88B CALML6 TAS1R3 RNF223 PERM1 LOC100287934 LOC148413 PRKCZ MRPL20 MMP23A MIR6726 FAM87B TMEM52 LINC01128 NOC2L SLC35E2B SAMD11 SKI CPSF3L FAM41C OR4F5 MIR6859-1 UBE2J2 DDX11L1 CDK11A CPTP GABRD TNFRSF4 MIR200A MTND2P28 ACAP3 HES4 KLHL17 TTLL10 C1orf159 LOC100133331 MMP23B LOC105378592 MIR6859-2 LOC100288175 ATAD3C TMEM240 FAM132A LOC729737 ISG15 CFAP74 SSU72 LOC105378949 LOC105378947 FAM138A TNFRSF18 AGRN MIR6808 LINC00115 MXRA8 CDK11B LOC284600 LOC107984841 ATAD3B AURKAIP1 ANKRD65 MIR6727 PUSL1 PLEKHN1 DVL1 LOC107985728 SDF4 FAAP20 MIB2 MIR429 OR4F16 MIR6723 NADK B3GALT6 LOC100130417 GNB1 LOC105378589 MIR1302-2 LOC105378591 VWA1 LOC100129534 LOC100132287 MIR200B TTLL10-AS1 WASH7P LOC101928626
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss TAS1R3 MIR6727 ACAP3 CPSF3L PUSL1 CPTP DVL1 MIR6808 MIR6726
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss TAS1R3 AURKAIP1 MIR6727 ACAP3 CPSF3L PUSL1 CPTP MXRA8 DVL1 SCNN1D MIR6808 MIR6726
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss SDF4 FAM132A MIR429 CPSF3L SCNN1D TNFRSF18 B3GALT6 MIR6808 UBE2J2 CPTP MXRA8 LINC01342 TNFRSF4 MIR200A TAS1R3 RNF223 AURKAIP1 MIR6727 ACAP3 PUSL1 MIR200B DVL1 TTLL10-AS1 TTLL10 MIR6726 C1orf159
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion TAS1R3 AURKAIP1 MIR6727 ACAP3 CPSF3L PUSL1 CPTP MXRA8 DVL1 SCNN1D MIR6808 MIR6726
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication LOC100288175 SDF4 FAM132A MIR429 CPSF3L SCNN1D TNFRSF18 B3GALT6 AGRN UBE2J2 LOC105378948 CPTP LINC01342 TNFRSF4 MIR200A TAS1R3 RNF223 MIR6727 ACAP3 PUSL1 MIR200B TTLL10-AS1 TTLL10 MIR6726 C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100288175 LOC100288069 ATAD3C TMEM240 FAM132A SLC35E2 ISG15 LOC107985729 SSU72 SCNN1D CCNL2 TNFRSF18 AGRN MIR6808 LINC00115 FNDC10 ATAD3A LOC105378948 MXRA8 LINC01342 LOC102724312 CDK11B LOC284600 TMEM88B ATAD3B TAS1R3 RNF223 AURKAIP1 ANKRD65 MIR6727 PUSL1 PERM1 PLEKHN1 DVL1 LOC100287934 LOC148413 LOC107985728 MRPL20 MMP23A MIR6726 FAM87B LINC01128 NOC2L SDF4 SLC35E2B SAMD11 MIB2 MIR429 CPSF3L NADK FAM41C B3GALT6 LOC100130417 UBE2J2 CDK11A CPTP TNFRSF4 VWA1 MIR200A ACAP3 MIR200B HES4 KLHL17 TTLL10-AS1 TTLL10 C1orf159 MMP23B
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain TAS1R3 MIR6727 ACAP3 CPSF3L PUSL1 CPTP MXRA8 DVL1 SCNN1D MIR6808 MIR6726
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ATAD3C SDF4 TMEM240 FAM132A LOC107985729 MIB2 MIR429 CPSF3L SSU72 SCNN1D CCNL2 TNFRSF18 B3GALT6 MIR6808 FNDC10 ATAD3A UBE2J2 CPTP MXRA8 LINC01342 LOC102724312 CDK11B TNFRSF4 VWA1 TMEM88B ATAD3B MIR200A TAS1R3 AURKAIP1 ANKRD65 MIR6727 ACAP3 PUSL1 MIR200B DVL1 TTLL10-AS1 LOC148413 TTLL10 MRPL20 MIR6726 C1orf159 MMP23B
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss UBE2J2 CPTP MXRA8 TAS1R3 AURKAIP1 MIR6727 ACAP3 CPSF3L PUSL1 DVL1 SCNN1D MIR6808 MIR6726
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC100288175 NOC2L SDF4 FAM132A ISG15 SAMD11 MIR429 CPSF3L SCNN1D CCNL2 TNFRSF18 B3GALT6 AGRN MIR6808 LOC100130417 UBE2J2 LOC105378948 CPTP MXRA8 LINC01342 TNFRSF4 LOC284600 TMEM88B MIR200A TAS1R3 RNF223 AURKAIP1 ANKRD65 MIR6727 ACAP3 PUSL1 MIR200B HES4 PERM1 PLEKHN1 KLHL17 DVL1 TTLL10-AS1 LOC148413 TTLL10 LOC107985728 MRPL20 MIR6726 C1orf159
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain UBE2J2 SDF4 TNFRSF4 FAM132A MIR200A MIR6727 MIR429 ACAP3 CPSF3L PUSL1 MIR200B SCNN1D TTLL10-AS1 TNFRSF18 B3GALT6 TTLL10 MIR6726

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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