Hs01336973_cn

• Gene Symbol: ADGRA1
• Assay Reference Genome Location: Chr.10:133080378 on build GRCh38
• Cytoband: 10q26.3

Target Gene Details

• Entrez Gene ID: 84435
• Gene Name: adhesion G protein-coupled receptor A1
• Gene Aliases: GPR123
• Location: Chr.10:133070929-133131675 on Build GRCh38
• Assay Gene Location: Overlaps Exon 4 - Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ADGRA1	XM_005252695.1			XP_005252752.1
	AY181241.1			AAO27353.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759793	Chr.10:133030918 - 133619181 on Build GRCh38	Gain+Loss	MIR202 MIR202HG SYCE1 ADGRA1 SPRN ECHS1 ZNF511 VENTX SCART1 PAOX PRAP1 KNDC1 UTF1 TUBGCP2 FUOM SPRNP1 CYP2E1 MIR3944 CALY MTG1 ADAM8 ADGRA1-AS1
dgv998n100	Chr.10:132998894 - 133170978 on Build GRCh38	Gain	KNDC1 ADGRA1 ADGRA1-AS1
esv3625022	Chr.10:132998655 - 133120915 on Build GRCh38	Gain	ADGRA1 ADGRA1-AS1
nsv467498	Chr.10:132900981 - 133134139 on Build GRCh38	Gain	LINC01167 ADGRA1 LINC01166 CFAP46 ADGRA1-AS1 LINC01168
esv3625015	Chr.10:132889012 - 133114687 on Build GRCh38	Gain	LINC01167 ADGRA1 LINC01166 CFAP46 ADGRA1-AS1 LINC01168
nsv1054934	Chr.10:130334322 - 133158679 on Build GRCh38	Gain	LINC01167 LINC01164 DPYSL4 JAKMIP3 TCERG1L INPP5A ADGRA1 STK32C BNIP3 LOC105378568 LINC01166 PWWP2B LOC107984282 LRRC27 MIR378C C10orf91 PPP2R2D CFAP46 TCERG1L-AS1 ADGRA1-AS1 LINC01168 NKX6-2
nsv528260	Chr.10:132859348 - 133620799 on Build GRCh38	Loss	LINC01167 MIR202HG SPRN LINC01166 PAOX KNDC1 FUOM CYP2E1 MIR3944 CALY MTG1 ADAM8 ADGRA1-AS1 LINC01168 MIR202 SYCE1 ADGRA1 ECHS1 ZNF511 VENTX SCART1 PRAP1 UTF1 TUBGCP2 SPRNP1 CFAP46
nsv952703	Chr.10:133037897 - 133143896 on Build GRCh38	Deletion	ADGRA1 ADGRA1-AS1
nsv470979	Chr.10:133033478 - 133118280 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1
nsv552526	Chr.10:132699017 - 133103793 on Build GRCh38	Gain	LINC01167 INPP5A ADGRA1 LINC01166 CFAP46 ADGRA1-AS1 LINC01168 NKX6-2
nsv552539	Chr.10:133061918 - 133103793 on Build GRCh38	Loss	ADGRA1 ADGRA1-AS1

More Information

Additional Information:

For this assay, SNP(s) [rs111832420] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

signal transduction
cell surface receptor signaling pathway
G-protein coupled receptor signaling pathway

Function(s)

G-protein coupled receptor activity