Name: [Hs01386916_cn] [SLTM]
Creator: Thermo Fisher Scientific
Keywords: [SLTM] Assay, [SAFB like transcription modulator] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	79811
Gene Name:	SAFB like transcription modulator
Gene Aliases:	Met
Location:	Chr.15:58879045-58934313 on Build GRCh38
Assay Gene Location:	Within Exon 22

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLTM	NM_001013843.2	21	3432	NP_001013865.1
	NM_024755.3	21	3486	NP_079031.2
	NR_135042.1	19	2819
	NR_135043.1	19	2929
	XM_006720686.3	19	3877	XP_006720749.3
	XM_006720690.1	17	2583	XP_006720753.1
	XM_011522022.1	21	4144	XP_011520324.1
	XM_011522023.1	21	4090	XP_011520325.1
	XM_011522024.1	20	3994	XP_011520326.1
	XM_011522025.1	20	3946	XP_011520327.1
	XM_011522026.2	20	3925	XP_011520328.2
	XM_011522027.1	19	3898	XP_011520329.1
	XM_011522028.1	19	3844	XP_011520330.1
	XM_011522029.2	21	3325	XP_011520331.1
	XM_011522031.2	18	2980	XP_011520333.1
	XM_017022576.1	20	3282	XP_016878065.1
	XM_017022577.1	20	3871	XP_016878066.1
	XM_017022578.1	19	3823	XP_016878067.1
	XM_017022579.1	21	3489	XP_016878068.1
	XM_017022580.1	20	2943	XP_016878069.1
	AK023275.1	11	1940	BAB14502.1
	AK055195.1	19	2722
	AK291423.1	19	2852
	AL834297.1	7	1381	CAH56362.1
	BC014944.1	14	2289	AAH14944.1
	BC046119.1	10	1781
	BC140851.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527307	Chr.15:58811129 - 59726288 on Build GRCh38	Gain	MIR2116 GCNT3 BNIP2 FAM81A RNF111 SLTM GTF2A2 LDHAL6B CCNB2 MYO1E FAM63B
nsv1035640	Chr.15:58813161 - 58898731 on Build GRCh38	Gain	SLTM FAM63B
esv34110	Chr.15:58657792 - 59089435 on Build GRCh38	Loss	HSP90AB4P RNF111 ADAM10 LOC101928725 SLTM FAM63B
nsv94675	Chr.15:58872682 - 58882181 on Build GRCh38	Deletion	SLTM

Intragenic

Exonic

DGV Variation

Function(s) Process(es)