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See other SLC6A11 CNV Assays ›
Gene Symbol
SLC6A11
Assay Reference Genome
Location

Chr.3:10819739 on build GRCh38
Cytoband
3p25.3
Assay ID Hs01396125_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6538

Gene Name:

 solute carrier family 6 member 11

Gene Aliases:

 GAT-3, GAT3, GAT4

Location:

 Chr.3:10816200-10940733 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A11 NM_001317406.1 NP_001304335.1
NM_014229.2 NP_055044.1
XM_011534033.2 XP_011532335.1
XM_017007073.1 XP_016862562.1
AK312719.1
BC036083.1 AAH36083.1
S75989.1 AAB33570.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion LINC00852 SEC13 HRH1 ATP2B2-IT2 SLC6A1 FANCD2 ATP2B2 SLC6A1-AS1 GHRLOS TAMM41 LINC00606 GHRL VGLL4 SLC6A11 VHL ATG7 IRAK2 LOC101927467 FANCD2OS BRK1 TATDN2 MIR885 MIR378B
nsv1003810 Chr.3:10788346 - 10821404 on Build GRCh38 Gain SLC6A11
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion LINC00852 SLC6A1 ATP2B2 LINC00606 GHRL SLC6A11 VHL LOC401052 IRAK2 LOC101927467 FANCD2P2 MIR378B EMC3 SEC13 HRH1 ATP2B2-IT2 FANCD2 SLC6A1-AS1 GHRLOS TAMM41 VGLL4 ATG7 FANCD2OS BRK1 TATDN2 CIDECP MIR885
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion LINC00852 SEC13 HRH1 ATP2B2-IT2 SLC6A1 FANCD2 ATP2B2 SLC6A1-AS1 GHRLOS TAMM41 LINC00606 GHRL VGLL4 SLC6A11 VHL ATG7 IRAK2 LOC101927467 FANCD2OS FANCD2P2 BRK1 TATDN2 MIR885 MIR378B
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion LINC00852 SEC13 HRH1 ATP2B2-IT2 SLC6A1 FANCD2 ATP2B2 SLC6A1-AS1 GHRLOS TAMM41 LINC00606 GHRL VGLL4 SLC6A11 VHL ATG7 IRAK2 LOC101927467 FANCD2OS FANCD2P2 BRK1 TATDN2 MIR885 MIR378B
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion LINC00852 SLC6A1 ATP2B2 LINC00606 GHRL SLC6A11 VHL LOC401052 IRAK2 LOC101927467 FANCD2P2 MIR378B EMC3 SEC13 HRH1 ATP2B2-IT2 FANCD2 SLC6A1-AS1 GHRLOS TAMM41 EMC3-AS1 VGLL4 ATG7 FANCD2OS BRK1 TATDN2 CIDECP MIR885
nsv998764 Chr.3:10803628 - 10835085 on Build GRCh38 Gain SLC6A11

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