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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775922 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01406366_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 7 905 NP_001244299.1
XM_017023025.1 7 827 XP_016878514.1
XM_017023026.1 6 818 XP_016878515.1
AK074080.2 6 989 BAB84906.2
EF452422.1 7 905

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss EME2 MIR3177 MRPS34 NUBP2 MAPK8IP3 NME3 SPSB3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HBZ LUC7L MSRB1 CACNA1H ARHGDIG MIR3180-5 WDR90 FAM173A RPL23AP5 RPUSD1 NPRL3 RHOT2 SLC9A3R2 LOC100134368 SNORD60 HBA1 JMJD8 IGFALS MPG RAB11FIP3 HAGHL ERVK13-1 SNHG19 CRAMP1 TELO2 MIR3677 PRR25 MIR6767 C1QTNF8 BRICD5 GNG13 NARFL DECR2 SSTR5-AS1 LOC107987233 AMDHD2 RNPS1 NME4 MIR6768 DDX11L10 HBQ1 TBC1D24 RHBDL1 MIR6511B1 RHBDF1 PGP ECI1 MIR6859-4 FAM234A MRPL28 ABCA3 NPW MAPK8IP3 HS3ST6 NDUFB10 C16orf59 SSTR5 GNPTG C16orf91 METTL26 MEIOB TBL3 LINC00254 LOC101929280 CHTF18 HAGH MIR662 TPSG1 TPSD1 MCRIP2 SNORA10 CCDC154 TPSAB1 RPL3L SPSB3 MIR4717 FLJ42627 EME2 WFIKKN1 RNF151 LOC652276 SNORA64 TRAF7 SNORA78 LOC105371184 TSC2 NTHL1 LMF1-AS1 LOC105371045 UBE2I ZNF598 HN1L LOC105371047 DNASE1L2 LOC106660606 MLST8 NTN3 ATP6V0C LOC107984876 LINC00235 SNRNP25 HBM FBXL16 MSLN NUBP2 TMEM204 AXIN1 PRSS27 METRN PIGQ LOC105371046 GFER LOC105371038 STUB1 CAPN15 LOC729652 CCNF MRPS34 PDPK1 E4F1 PTX4 LOC105371049 CCDC78 CEMP1 SNHG9 NME3 UNKL RGS11 IFT140 PDIA2 MIR4516 RPS2 LOC100287175 NHLRC4 TPSB2 PRSS29P PKD1 PRR35 TSR3 WASIR2 KCTD5 NOXO1 MIR940 MIR3177 POLR3K MIR5587 MIR1225 WDR24 RAB40C SYNGR3 MIR3178 SOX8 HBA2 RAB26 MIR3176 TMEM8A ABCA17P LMF1 FAHD1 BAIAP3 CLCN7 CASKIN1
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss EME2 MRPS34 NUBP2 MAPK8IP3 NME3 IGFALS SPSB3 HAGH
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion EME2 MIR3177 MRPS34 NUBP2 MAPK8IP3 NME3 IGFALS SPSB3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss EME2 MRPS34 NUBP2 MAPK8IP3 NME3 IGFALS SPSB3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss EME2 MIR3177 NUBP2 LOC105371046 CRAMP1 HAGH HN1L MRPS34 MAPK8IP3 NME3 IGFALS SPSB3 IFT140
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss EME2 MRPS34 NUBP2 MAPK8IP3 NME3 IGFALS SPSB3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss EME2 MIR3177 NUBP2 TMEM204 MEIOB LOC105371046 CRAMP1 TELO2 HAGH HN1L MRPS34 LOC105371047 FAHD1 MAPK8IP3 NME3 IGFALS SPSB3 IFT140
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain EME2 MRPS34 NUBP2 MAPK8IP3 NME3 IGFALS SPSB3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss EME2 MRPS34 MAPK8IP3 NME3 SPSB3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss EME2 MIR3177 NUBP2 MEIOB CRAMP1 HAGH HN1L MRPS34 FAHD1 MAPK8IP3 NME3 IGFALS SPSB3
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss EME2 MRPS34 NUBP2 MAPK8IP3 NME3 IGFALS SPSB3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion EME2 MIR3177 MRPS34 NUBP2 FAHD1 MAPK8IP3 NME3 IGFALS SPSB3 HAGH

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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