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See other JMJD7-PLA2G4B CNV Assays ›
Gene Symbol
JMJD7-PLA2G4B
Assay Reference Genome
Location

Chr.15:41844514 on build GRCh38
Cytoband
15q15.1
Assay ID Hs01445857_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8681

Gene Name:

 JMJD7-PLA2G4B readthrough

Gene Aliases:

 HsT16992, cPLA2-beta

Location:

 Chr.15:41828085-41848148 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
JMJD7-PLA2G4B NM_001198588.1 NP_001185517.1
NM_005090.3 NP_005081.1
AB209150.1 BAD92387.1
AF065215.1 AAC78836.1
AF065216.1
AF121908.1 AAD32135.1
DA080158.1
DQ523799.1
DQ523800.1

Target Gene Details

Entrez Gene ID:

 100137049

Gene Name:

 phospholipase A2 group IVB

Gene Aliases:

 HsT16992, cPLA2-beta

Location:

 Chr.15:41838813-41848148 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 11 - Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLA2G4B NM_001114633.1 NP_001108105.1
AK124489.1
AK299419.1
AK310651.1
BX648318.1 1 2002
CA488226.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9244 Chr.15:41818514 - 41916607 on Build GRCh38 Gain SPTBN5 JMJD7 EHD4 LOC105370792 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310
nsv1035998 Chr.15:41806698 - 42142056 on Build GRCh38 Gain PLA2G4E SPTBN5 EHD4 JMJD7-PLA2G4B MAPKBP1 PLA2G4F MIR4310 PLA2G4D JMJD7 LOC105370792 PLA2G4B PLA2G4E-AS1 EHD4-AS1
nsv1050892 Chr.15:41836657 - 41894284 on Build GRCh38 Gain SPTBN5 JMJD7 LOC105370792 PLA2G4B JMJD7-PLA2G4B MIR4310
nsv1506 Chr.15:41824733 - 41857173 on Build GRCh38 Insertion SPTBN5 JMJD7 PLA2G4B JMJD7-PLA2G4B MAPKBP1
nsv952613 Chr.15:41816803 - 41884902 on Build GRCh38 Deletion SPTBN5 JMJD7 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310
nsv517631 Chr.15:41804728 - 41895294 on Build GRCh38 Loss SPTBN5 JMJD7 LOC105370792 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310
dgv2582n100 Chr.15:41791376 - 41900562 on Build GRCh38 Gain SPTBN5 JMJD7 EHD4 LOC105370792 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310

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More Information


Additional Information:

For this assay, SNP(s) [rs145236773] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phospholipase

Gene Ontology Categories:

Function(s) Process(es)


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