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See other C9ORF139 CNV Assays ›
Gene Symbol
C9orf139
Assay Reference Genome
Location

Chr.9:137036279 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01468053_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 401563

Gene Name:

 chromosome 9 open reading frame 139

Gene Aliases:

 -

Location:

 Chr.9:137027464-137037770 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C9orf139 NM_207511.2 3 3312 NP_997394.1
XM_017014717.1 3 2277 XP_016870206.1
AK093587.1 2 1681 BAC04202.1
AK124899.1 3 3312 BAC85986.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss TMEM210 ABCA2 LOC101930307 MAN1B1-AS1 PRR31 PTGDS ENTPD2 NPDC1 MAN1B1 C9orf139 GRIN1 LRRC26 SAPCD2 LCNL1 CLIC3 DPP7 UAP1L1 FUT7 C9orf142 MIR3621
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss ABCA2 LOC101930307 PNPLA7 MAN1B1-AS1 TOR4A ENTPD8 TMEM203 RNF224 RNF208 SSNA1 TMEM210 PHPT1 C8G ANAPC2 ENTPD2 FAM166A NPDC1 C9orf139 MIR7114 LRRC26 SAPCD2 CLIC3 TRAF2 C9orf142 EXD3 C9orf172 NRARP STPG3 TUBB4B NSMF CCDC183 MAN1B1 GRIN1 MIR4479 MAMDC4 LCNL1 C9orf173-AS1 CYSRT1 FBXW5 EDF1 MIR4292 UAP1L1 PRR31 NDOR1 PTGDS SLC34A3 TPRN CCDC183-AS1 NELFB NOXA1 RABL6 DPP7 FUT7 MIR3621 LCN12
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion ABCA2 C8G LOC101930307 MAN1B1-AS1 PRR31 PTGDS ENTPD2 NPDC1 MAN1B1 C9orf139 SAPCD2 LCNL1 CLIC3 DPP7 UAP1L1 FUT7 C9orf142 LCN12
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LOC100128593 MIR126 ABCA2 NALT1 LOC101930307 MAN1B1-AS1 TMEM141 EGFL7 LCN8 CARD9 LCN15 AGPAT2 NOTCH1 SNAPC4 TMEM210 PHPT1 C8G ENTPD2 NPDC1 C9orf139 MIR6722 PMPCA LRRC26 SAPCD2 C9orf163 INPP5E CLIC3 LCN6 MIR4674 FAM69B TRAF2 SEC16A C9orf142 C9orf172 DNLZ CCDC183 SNHG7 MAN1B1 GRIN1 MIR4479 MAMDC4 LCNL1 SDCCAG3 FBXW5 EDF1 MIR4292 UAP1L1 HSPC324 MIR4673 PRR31 PTGDS SNORA17B CCDC183-AS1 RABL6 DPP7 LINC01451 LCN10 FUT7 SNORA17A MIR3621 LCN12
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain SSNA1 TMEM210 LOC101930307 ANAPC2 MAN1B1-AS1 ENTPD2 NPDC1 MAN1B1 C9orf139 GRIN1 LRRC26 SAPCD2 DPP7 UAP1L1 FUT7 MIR3621
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss ABCA2 ENTPD2 NPDC1 C9orf139 FUT7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion LOC100128593 MIR126 ABCA2 LOC101930307 MAN1B1-AS1 TOR4A TMEM141 TMEM203 RNF224 EGFL7 LCN8 LCN15 AGPAT2 RNF208 SSNA1 TMEM210 PHPT1 C8G ANAPC2 ENTPD2 FAM166A NPDC1 C9orf139 MIR6722 LRRC26 SAPCD2 CLIC3 LCN6 FAM69B TRAF2 C9orf142 EXD3 C9orf172 NRARP STPG3 TUBB4B CCDC183 SNHG7 MAN1B1 GRIN1 MIR4479 MAMDC4 LCNL1 C9orf173-AS1 CYSRT1 FBXW5 EDF1 MIR4292 UAP1L1 HSPC324 PRR31 NDOR1 PTGDS SLC34A3 SNORA17B TPRN CCDC183-AS1 NELFB RABL6 DPP7 LINC01451 LCN10 FUT7 SNORA17A MIR3621 LCN12

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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