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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2073652 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01472325_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_001033581.1 NP_001028753.1
NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_011541776.1 XP_011540078.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001792.1 XP_016857281.1
XM_017001796.1 XP_016857285.1
XM_017001802.1 XP_016857291.1
XM_017001803.1 XP_016857292.1
XM_017001804.1 XP_016857293.1
AK290995.1
AK294649.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
CB152283.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion LOC105378591 GABRD PRKCZ
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6726 GNB1 LOC105378949 CDK11A LOC100129534 RNF223 LINC01128 LOC100133331 MIR200B FAM138A LOC148413 LOC100132287 LOC107985729 TNFRSF18 FAM87B LOC100130417 UBE2J2 LOC100506504 FNDC10 MTND1P23 CALML6 MRPL20 MIR6808 LOC107984841 AGRN MMP23B OR4F5 CPTP NOC2L PRKCZ LOC107985728 LINC00115 LOC105378592 LOC105378947 TTLL10 LOC102724312 MIR6727 LOC105378591 ATAD3A NADK CDK11B ATAD3C LOC100134822 GABRD TNFRSF4 MIR6859-2 ISG15 MTND2P28 SLC35E2 SSU72 FAM41C MIR1302-2 ACAP3 DDX11L1 VWA1 CCNL2 TMEM88B WASH7P KLHL17 ATAD3B LOC284600 TMEM240 CPSF3L MIR6723 MIR200A SKI SLC35E2B HES4 ANKRD65 C1orf159 PERM1 SCNN1D SAMD11 LOC105378589 OR4F29 LINC01342 MMP23A LOC102725121 LOC100288069 LOC105378948 MIR6859-1 MORN1 PLEKHN1 LOC101928626 MIB2 FAAP20 MIR429 FAM132A MXRA8 B3GALT6 AURKAIP1 LOC100287934 DVL1 LOC100288175 SDF4 LOC729737 CFAP74 PUSL1 TAS1R3 TTLL10-AS1 OR4F16 TMEM52
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss LOC105378591 LOC105378589 CFAP74 GABRD PRKCZ
nsv2520 Chr.1:2063294 - 2089621 on Build GRCh38 Insertion PRKCZ
nsv509479 Chr.1:2072311 - 2176998 on Build GRCh38 Insertion PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss GNB1 MMP23A CCNL2 LOC105378949 CDK11A TMEM88B PRKCZ ATAD3B TMEM240 LOC148413 MIB2 LOC107985729 LOC102724312 SLC35E2B ANKRD65 LOC105378591 ATAD3A NADK CDK11B ATAD3C GABRD FNDC10 LOC105378589 CALML6 MRPL20 SLC35E2 CFAP74 SSU72 MMP23B VWA1 TMEM52

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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