Hs01506446_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7403375 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	BM749297.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1
	AK290117.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	GPS2 TMEM102 SAT2 SENP3-EIF4A1 SLC16A13 SPEM1 CD68 ASGR2 SLC2A4 DLG4 ATP1B2 SNORA48 ELP5 LOC107983988 TMEM95 TEKT1 C17orf74 ALOX12P2 NEURL4 MIR497 ZBTB4 C17orf49 ALOX12 SNORA67 TNK1 SOX15 LOC100996842 SLC35G6 EIF5A MIR497HG TNFSF12-TNFSF13 ASGR1 TNFSF13 SHBG FGF11 EIF4A1 SNORD10 GABARAP YBX2 CHRNB1 ACADVL ACAP1 MIR324 TMEM256-PLSCR3 POLR2A RNASEK-C17orf49 TNFSF12 SENP3 DVL2 KCTD11 SLC16A11 MIR195 CLDN7 MPDU1 ALOX12-AS1 PLSCR3 CLEC10A BCL6B FXR2 CTDNEP1 RNASEK PHF23 FBXO39 TMEM256 NLGN2
esv2662967	Chr.17:7403326 - 7408473 on Build GRCh38	Deletion	TMEM256-PLSCR3 TMEM256 NLGN2
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	TMEM102 CHRNB1 PLSCR3 SPEM1 ZBTB4 TMEM256-PLSCR3 TNK1 SLC35G6 TNFSF12-TNFSF13 POLR2A LOC107983988 FGF11 TNFSF12 TMEM256 C17orf74 NLGN2
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	PLSCR3 TMEM256-PLSCR3 TMEM256
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	YBX2 GPS2 TMEM102 CHRNB1 ACADVL SPEM1 ACAP1 MIR324 TMEM256-PLSCR3 SLC2A4 DLG4 ELP5 LOC107983988 TMEM95 C17orf74 DVL2 KCTD11 NEURL4 CLDN7 PLSCR3 TNK1 EIF5A CTDNEP1 PHF23 ASGR1 FGF11 TMEM256 NLGN2 GABARAP
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	PLSCR3 SPEM1 LOC107983988 TMEM256-PLSCR3 TNK1 TMEM256 C17orf74 NLGN2
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	GPS2 TMEM102 SAT2 SENP3-EIF4A1 SLC16A13 SPEM1 CD68 ASGR2 SLC2A4 DLG4 ATP1B2 SNORA48 ELP5 LOC107983988 TMEM95 C17orf74 NEURL4 MIR497 ZBTB4 C17orf49 ALOX12 SNORA67 TNK1 SOX15 LOC100996842 TP53 SLC35G6 EIF5A MIR497HG TNFSF12-TNFSF13 ASGR1 TNFSF13 SHBG FGF11 EIF4A1 SNORD10 GABARAP YBX2 CHRNB1 ACADVL ACAP1 MIR324 TMEM256-PLSCR3 POLR2A RNASEK-C17orf49 TNFSF12 SENP3 DVL2 KCTD11 SLC16A11 MIR195 CLDN7 MPDU1 ALOX12-AS1 PLSCR3 CLEC10A BCL6B FXR2 CTDNEP1 WRAP53 RNASEK PHF23 TMEM256 NLGN2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function