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See other GRIN1 CNV Assays ›
Gene Symbol
GRIN1
Assay Reference Genome
Location

Chr.9:137145781 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01559959_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2902

Gene Name:

 glutamate ionotropic receptor NMDA type subunit 1

Gene Aliases:

 GluN1, MRD8, NMD-R1, NMDA1, NMDAR1, NR1

Location:

 Chr.9:137139092-137168762 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GRIN1 NM_000832.6 3 779 NP_000823.4
NM_001185090.1 3 779 NP_001172019.1
NM_001185091.1 3 779 NP_001172020.1
NM_007327.3 3 779 NP_015566.1
NM_021569.3 3 779 NP_067544.1
XM_005266071.3 3 449 XP_005266128.1
XM_005266072.3 3 783 XP_005266129.1
XM_005266073.4 3 844 XP_005266130.1
XM_011518583.2 3 783 XP_011516885.1
AB208918.1 3 526 BAD92155.1
AB208999.1 3 761 BAD92236.1
AF015730.1 3 522 AAB67723.1
AF015731.1 3 520 AAB67724.1
D13515.1 3 620 BAA02732.1
L05666.1 3 466 AAA21180.1
L13266.1 3 1542 AAB59360.1
L13268.1 3 419 AAB59361.1
U08107.1 2 194 AAA62112.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MAN1B1 GRIN1 NPDC1 FUT7 C9orf142 ABCA2 UAP1L1 LCNL1 ENTPD2 DPP7 SAPCD2 CLIC3 C9orf139 LRRC26 LOC101930307 TMEM210 PTGDS PRR31 MAN1B1-AS1 MIR3621
nsv616007 Chr.9:137079368 - 137240666 on Build GRCh38 Loss RNF208 MAN1B1 GRIN1 ANAPC2 UAP1L1 TPRN DPP7 RNF224 CYSRT1 SSNA1 SLC34A3 LRRC26 TMEM203 LOC101930307 TMEM210 MAN1B1-AS1 NDOR1 MIR3621
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss SAPCD2 MAN1B1 GRIN1 LOC101930307 UAP1L1 ENTPD2 DPP7 MAN1B1-AS1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss RNF208 MAN1B1 PHPT1 EDF1 FUT7 C8G NELFB TPRN STPG3 NSMF NOXA1 SLC34A3 PTGDS TRAF2 GRIN1 NPDC1 UAP1L1 SAPCD2 TOR4A TUBB4B C9orf173-AS1 C9orf139 LRRC26 MAMDC4 TMEM210 MIR4292 ENTPD8 CCDC183-AS1 PNPLA7 C9orf142 ABCA2 RABL6 FBXW5 DPP7 CCDC183 CYSRT1 SSNA1 MIR3621 LCN12 C9orf172 ANAPC2 LCNL1 ENTPD2 MIR4479 EXD3 FAM166A RNF224 CLIC3 NRARP TMEM203 LOC101930307 MIR7114 PRR31 MAN1B1-AS1 NDOR1
nsv951207 Chr.9:137136949 - 137379148 on Build GRCh38 Deletion RNF208 GRIN1 ANAPC2 NELFB TPRN EXD3 STPG3 FAM166A RNF224 CYSRT1 TOR4A TUBB4B C9orf173-AS1 NRARP SSNA1 SLC34A3 LRRC26 TMEM203 TMEM210 NDOR1 MIR3621
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LCN15 MAN1B1 PHPT1 EDF1 FUT7 C8G EGFL7 C9orf163 FAM69B MIR126 LOC100128593 LCN6 MIR4673 PTGDS TRAF2 GRIN1 NPDC1 SNHG7 UAP1L1 SDCCAG3 NOTCH1 PMPCA AGPAT2 HSPC324 LINC01451 SAPCD2 LCN10 C9orf139 LRRC26 MAMDC4 TMEM210 MIR4292 CCDC183-AS1 MIR6722 LCN8 C9orf142 ABCA2 RABL6 DNLZ CARD9 FBXW5 DPP7 SNORA17A CCDC183 NALT1 MIR4674 MIR3621 TMEM141 LCN12 SNORA17B C9orf172 INPP5E LCNL1 ENTPD2 MIR4479 SEC16A CLIC3 LOC101930307 SNAPC4 PRR31 MAN1B1-AS1
nsv1161918 Chr.9:137118319 - 137438026 on Build GRCh38 Duplication RNF208 ENTPD8 GRIN1 ANAPC2 NELFB TPRN EXD3 STPG3 FAM166A RNF224 CYSRT1 TOR4A TUBB4B C9orf173-AS1 NRARP NOXA1 SSNA1 SLC34A3 LRRC26 TMEM203 TMEM210 NDOR1 MIR3621
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss MAN1B1 GRIN1 NPDC1 UAP1L1 ENTPD2 DPP7 SAPCD2 C9orf139 LRRC26 LOC101930307 TMEM210 MAN1B1-AS1 MIR3621
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain MAN1B1 GRIN1 NPDC1 FUT7 ANAPC2 UAP1L1 ENTPD2 DPP7 SAPCD2 C9orf139 SSNA1 LRRC26 LOC101930307 TMEM210 MAN1B1-AS1 MIR3621
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion RNF208 LCN15 MAN1B1 PHPT1 EDF1 FUT7 C8G NELFB TPRN EGFL7 STPG3 FAM69B SLC34A3 MIR126 LOC100128593 LCN6 PTGDS TRAF2 GRIN1 NPDC1 SNHG7 UAP1L1 AGPAT2 HSPC324 LINC01451 SAPCD2 LCN10 TOR4A TUBB4B C9orf173-AS1 C9orf139 LRRC26 MAMDC4 TMEM210 MIR4292 CCDC183-AS1 MIR6722 LCN8 C9orf142 ABCA2 RABL6 FBXW5 DPP7 SNORA17A CCDC183 CYSRT1 SSNA1 MIR3621 TMEM141 LCN12 SNORA17B C9orf172 ANAPC2 LCNL1 ENTPD2 MIR4479 EXD3 FAM166A RNF224 CLIC3 NRARP TMEM203 LOC101930307 PRR31 MAN1B1-AS1 NDOR1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)


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