Genomic Map
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Target Gene Details
Entrez Gene ID: | 199990 |
Gene Name: | Fanconi anemia core complex associated protein 20 |
Gene Aliases: |
C1orf86, FP7162 |
Location: |
Chr.1:2184460-2212720 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| FAAP20 | NM_001146310.1 | NP_001139782.1 | ||
| NM_001256945.1 | NP_001243874.1 | |||
| NM_001256947.1 | 3 | 419 | NP_001243876.1 | |
| NM_001282670.1 | 8 | 3401 | NP_001269599.1 | |
| NM_001282671.1 | NP_001269600.1 | |||
| NM_001282672.1 | NP_001269601.1 | |||
| NM_001282673.1 | NP_001269602.1 | |||
| NM_182533.2 | 4 | 555 | NP_872339.2 | |
| NR_046427.1 | 4 | 748 | ||
| XM_006710419.3 | 6 | 1271 | XP_006710482.1 | |
| XM_006710421.3 | 5 | 661 | XP_006710484.1 | |
| XM_011540914.2 | 10 | 1222 | XP_011539216.1 | |
| XM_011540921.2 | 7 | 1071 | XP_011539223.1 | |
| XM_011540922.1 | 5 | 685 | XP_011539224.1 | |
| XM_017000553.1 | 8 | 1069 | XP_016856042.1 | |
| XM_017000554.1 | XP_016856043.1 | |||
| XM_017000557.1 | 4 | 555 | XP_016856046.1 | |
| AF461903.1 | 4 | 2369 | AAQ04817.1 | |
| AF469129.1 | AAP97719.1 | |||
| AK054818.1 | 1 | 2025 | ||
| AK055593.1 | BAB70965.1 | |||
| AK125445.1 | 1 | 2872 | ||
| AK126870.1 | 8 | 3400 | BAC86730.1 | |
| AK127994.1 | BAC87220.1 | |||
| AK128507.1 | 1 | 3863 | ||
| AL545931.3 | 4 | 711 | ||
| BC066360.1 | 4 | 552 | AAH66360.1 | |
| BC103992.2 | AAI03993.1 | |||
| BG825658.1 | ||||
| BU192678.1 | ||||
| BU542153.1 | 3 | 380 | ||
| BU626113.1 | 1 | 191 | ||
| CN397640.1 | 3 | 398 | ||
| DA596011.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv461727 | Chr.1:2151050 - 2251031 on Build GRCh38 | Loss |
 LOC105378592
FAAP20
LOC100506504
PRKCZ
SKI
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
CPTP
MIR200B
LOC100134822
LOC148413
TNFRSF4
SDF4
TMEM240
CDK11A
FAM138A
PUSL1
SSU72
ANKRD65
CDK11B
LOC105378592
LOC284600
HES4
ACAP3
LOC105378589
LINC01342
ATAD3C
MIR6859-1
MIR429
MMP23B
TMEM52
B3GALT6
LINC01128
ISG15
MIR6727
ATAD3A
LOC100287934
MORN1
TNFRSF18
MIB2
GABRD
MIR1302-2
SAMD11
SLC35E2
LOC107984841
MTND1P23
FAM87B
NADK
KLHL17
LOC100288069
LOC729737
OR4F16
MIR6808
LOC100132287
LOC105378591
VWA1
MXRA8
LOC105378948
TTLL10-AS1
FAAP20
MTND2P28
OR4F5
DVL1
CCNL2
SLC35E2B
FNDC10
PLEKHN1
LOC100129534
PERM1
FAM132A
LOC100288175
MRPL20
LOC100506504
MIR6723
MMP23A
WASH7P
AURKAIP1
DDX11L1
LOC100130417
LINC00115
MIR6726
CFAP74
SCNN1D
LOC102725121
PRKCZ
LOC107985728
TMEM88B
LOC101928626
LOC100133331
LOC105378947
LOC107985729
OR4F29
TAS1R3
AGRN
FAM41C
LOC102724312
ATAD3B
C1orf159
SKI
MIR6859-2
GNB1
LOC105378949
CPSF3L
TTLL10
MIR200A
NOC2L
RNF223
CALML6
UBE2J2
|
| nsv951530 | Chr.1:2153662 - 2229961 on Build GRCh38 | Deletion |
LOC105378592
FAAP20
LOC100506504
PRKCZ
SKI
|
| nsv470682 | Chr.1:2188394 - 2378754 on Build GRCh38 | Loss |
MORN1
LOC105378592
FAAP20
LOC100129534
SKI
|
| nsv834557 | Chr.1:2117631 - 2311104 on Build GRCh38 | Loss |
LOC105378592
FAAP20
LOC100506504
PRKCZ
SKI
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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