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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49659763 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01593351_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 8 1438 NP_001184051.1
NM_001197123.1 8 1480 NP_001184052.1
NM_001197124.1 7 1041 NP_001184053.1
NM_001197125.1 7 1249 NP_001184054.1
NM_001197126.1 6 1077 NP_001184055.1
NM_001197127.1 6 868 NP_001184056.1
NM_001197128.1 5 696 NP_001184057.1
NM_001571.5 8 1422 NP_001562.1
NR_045568.1 8 1569
XM_006723197.1 8 1416 XP_006723260.1
XM_006723198.1 8 1352 XP_006723261.1
XM_006723200.1 7 1101 XP_006723263.1
XM_006723201.1 7 1174 XP_006723264.1
XM_006723202.2 8 1323 XP_006723265.1
XM_017026766.1 8 1391 XP_016882255.1
XM_017026767.1 8 1336 XP_016882256.1
AA568913.1 1 200
AB102886.1 3 350 BAD89415.1
AB102887.1 6 788 BAD89416.1
AK292027.1 8 1551
AK314421.1 8 1335
BC000660.2 8 1340 AAH00660.1
BC009395.2 8 1365 AAH09395.1
BC071721.1 7 1511 AAH71721.1
BM477213.1 3 300
BU859806.1 3 573
HM357932.1 8 1310
HM357933.1 5 526
HM357934.1 6 907
HM357935.1 6 698
HM357936.1 7 871
HM357937.1 7 1079
Z56281.1 8 1215 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRR12 IRF3 SCAF1 NOSIP CPT1C MIR5088 PRRG2 BCL2L12 PRMT1 RRAS
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRR12 IRF3 SCAF1 NOSIP CPT1C MIR5088 PRRG2 BCL2L12 PRMT1 RRAS
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss RASIP1 MIR6800 ZNF114 SNORD32A SNAR-A14 FUT1 MIR4751 SNAR-G2 PRR12 FUT2 MIR5088 SNAR-A10 SNAR-A4 SYNGR4 C19orf68 SNAR-A13 SNAR-A5 MAMSTR IRF3 PTH2 SIGLEC16 SNAR-A12 EMP3 SNAR-A11 ATF5 MIR150 CGB1 PLEKHA4 SNORD34 CD37 FTL AKT1S1 FAM83E SULT2B1 LHB RPS11 PNKP MIR4324 DKKL1 PRMT1 RRAS SIGLEC11 BCAT2 CABP5 IZUMO1 KDELR1 TRPM4 CYTH2 NUCB1-AS1 SNAR-C3 FLT3LG SNAR-G1 SNORD33 TBC1D17 PTOV1 VRK3 PPFIA3 SNAR-C4 SLC17A7 C19orf73 RPL18 NUP62 LOC100287477 FCGRT AP2A1 GYS1 LIN7B PLA2G4C-AS1 FGF21 GRIN2D CCDC114 NUCB1 LMTK3 CGB5 KCNJ14 LOC101928295 SNAR-A9 MED25 NOSIP TMEM143 NTF4 LOC105372430 SNAR-A1 FLJ26850 CA11 DBP MIR6799 MIR4750 SNAR-C5 GRWD1 SPACA4 SNRNP70 PIH1D1 RPL13A LOC101059948 SNAR-A8 ADM5 IL4I1 CARD8-AS1 CGB3 GFY SNAR-A7 SNAR-C2 PPP1R15A SNAR-A6 TEAD2 PRRG2 CCDC155 BAX BSPH1 SNORD35B SCAF1 LOC105447645 PTOV1-AS2 SNAR-A3 SNAR-D CGB8 MIR6798 DHDH CARD8 BCL2L12 SNAR-B2 HSD17B14 ZNF473 LIG1 TULP2 CPT1C ELSPBP1 SLC6A16 MIR4749 CGB2 RCN3 SPHK2 NTN5 HRC PLA2G4C SNAR-C1 FUZ RUVBL2 SEC1P KCNA7 PTOV1-AS1 CGB7 ALDH16A1 SNORD35A TSKS SNAR-A2 SNAR-B1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 PRR12 IRF3 SCAF1 CPT1C MIR5088 BCL2L12 PRMT1 RRAS
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PNKP MIR6800 PRRG2 PRMT1 MIR4751 RRAS PRR12 MED25 SCAF1 NOSIP PTOV1-AS2 MIR5088 BCL2L12 IRF3 MIR6799 MIR4750 CPT1C MIR4749 ATF5 TBC1D17 PTOV1 ADM5 FUZ IL4I1 PTOV1-AS1 NUP62 AKT1S1 TSKS AP2A1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 PRR12 IRF3 SCAF1 NOSIP CPT1C MIR5088 PRRG2 BCL2L12 PRMT1 RRAS
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion RPS11 MIR6800 SNORD32A PRRG2 PRMT1 RRAS SNORD35B PRR12 MED25 SCAF1 NOSIP MIR5088 BCL2L12 IRF3 MIR6799 CPT1C RCN3 MIR150 SNORD33 RPL13A ADM5 FUZ SNORD34 PTOV1-AS1 SNORD35A TSKS FCGRT AP2A1
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRR12 IRF3 SCAF1 NOSIP PRRG2 BCL2L12 PRMT1 RRAS
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

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