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Gene Symbol
GPSM3
Assay Reference Genome
Location

Chr.6:32191047 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01604808_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 63940

Gene Name:

 G-protein signaling modulator 3

Gene Aliases:

 AGS4, C6orf9, G18, G18.1a, G18.1b, G18.2, NG1

Location:

 Chr.6:32190766-32195523 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GPSM3 NM_001276501.1 4 1204 NP_001263430.1
NM_022107.2 8 1175 NP_071390.1
AF155657.1 4 823 AAF67476.1
AJ243937.1 8 1175 CAB51287.1
BC018724.1 4 867 AAH18724.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PPT2-EGFL8 LOC100507547 PRRT1 AGER EGFL8 FKBPL GPSM3 PPT2 MIR6721 MIR6833 PBX2 AGPAT1 RNF5 NOTCH4 TNXB ATF6B
nsv602109 Chr.6:32190542 - 32193653 on Build GRCh38 Loss GPSM3
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss LOC101929163 PPT2-EGFL8 PRRT1 HLA-DQB2 FKBPL MIR3135B GPSM3 PPT2 HLA-DQA2 C6orf10 HLA-DQB1-AS1 HLA-DQA1 AGPAT1 CYP21A1P NOTCH4 ATF6B C4A BTNL2 HLA-DRB1 LOC100507547 TNXA AGER EGFL8 HLA-DRB6 CYP21A2 HLA-DRA MIR6721 MIR6833 C4B PBX2 HLA-DQB1 RNF5 HCG23 TNXB HLA-DRB5
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss PRRT1 EHMT2 GPSM3 HLA-DQB1-AS1 HLA-DQA1 SNORD52 CYP21A1P ZBTB12 ATF6B C4A BTNL2 HLA-DRB1 C2-AS1 DXO AGER HLA-DRB6 CFB C6orf48 HSPA1A MIR6833 C4B HLA-DQB1 RNF5 NEU1 HCG23 C2 HLA-DRB5 LOC101929163 SLC44A4 PPT2-EGFL8 FKBPL STK19 HSPA1B PPT2 C6orf10 SNORD48 AGPAT1 NOTCH4 LOC100507547 MIR1236 TNXA EGFL8 CYP21A2 HLA-DRA MIR6721 SKIV2L PBX2 TNXB NELFE
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss PPT2-EGFL8 PRRT1 FKBPL GPSM3 STK19 PPT2 AGPAT1 CYP21A1P NOTCH4 ATF6B C4A LOC100507547 C2-AS1 MIR1236 TNXA DXO AGER EGFL8 CFB CYP21A2 MIR6721 MIR6833 SKIV2L C4B PBX2 RNF5 TNXB C2 NELFE
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G6C PRRT1 CLIC1 LY6G6F LY6G6E HCP5 EHMT2 MIR6832 GPSM3 SNORA38 NCR3 LTB AIF1 SNORD52 BAG6 C6orf25 CYP21A1P MSH5-SAPCD1 PRRC2A NFKBIL1 ZBTB12 ATF6B MICB C4A HCG26 BTNL2 HLA-DRB1 CSNK2B ATP6V1G2 C2-AS1 DXO AGER LSM2 HSPA1L HLA-DRB6 CFB LY6G6D APOM C6orf48 HSPA1A MIR6833 DDX39B C4B SNORD84 RNF5 NEU1 HCG23 C2 HLA-DRB5 LOC101929163 SLC44A4 PPT2-EGFL8 LOC100287329 FKBPL MCCD1 ABHD16A STK19 HSPA1B PPT2 C6orf10 SNORD117 SNORD48 LTA AGPAT1 SAPCD1-AS1 NOTCH4 VARS TNF LOC102725068 LOC100507547 MIR1236 TNXA EGFL8 VWA7 C6orf47 CYP21A2 DDX39B-AS1 HLA-DRA MIR6721 ATP6V1G2-DDX39B SKIV2L DDAH2 PBX2 LY6G5C MSH5 MIR4646 TNXB SAPCD1 NELFE GPANK1 LY6G5B LST1
nsv602105 Chr.6:32183666 - 32210123 on Build GRCh38 Loss PBX2 AGER NOTCH4 GPSM3
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MIR5004 LY6G6E EHMT2 GPSM3 HLA-DQB1-AS1 PSMB9 LTB BAG6 C6orf25 PSMB8-AS1 ATF6B HCG26 HLA-DRB1 ATP6V1G2 C2-AS1 HCG24 DXO AGER PHF1 LSM2 HSPA1L LY6G6D APOM C6orf48 DDX39B HLA-DQB1 RPS18 NEU1 TAP2 LOC101929163 PFDN6 HLA-DPB1 LOC100287329 RGL2 HLA-DOB MCCD1 HLA-DMB ABHD16A MIR3135B HSPA1B PPT2 RING1 SNORD117 SNORD48 ZBTB9 HLA-DMA SAPCD1-AS1 NOTCH4 TNF LOC102725068 MIR1236 KIFC1 EGFL8 VWA7 HLA-DRA MIR6721 SKIV2L DDAH2 HSD17B8 PPP1R2P1 LY6G5C MIR219A1 TAPBP MIR4646 TNXB SAPCD1 NELFE LY6G6C PRRT1 CLIC1 HCG25 LY6G6F HCP5 MIR6832 SNORA38 PSMB8 SYNGAP1 NCR3 AIF1 HLA-DQA1 SNORD52 LOC100294145 CYP21A1P MSH5-SAPCD1 PRRC2A NFKBIL1 ZBTB12 MICB C4A B3GALT4 BTNL2 CSNK2B CUTA HLA-DRB6 CFB HSPA1A RXRB MIR6833 C4B VPS52 SNORD84 RNF5 HCG23 TAP1 C2 HLA-DRB5 ZBTB22 SLC39A7 SLC44A4 PPT2-EGFL8 HLA-DQB2 FKBPL STK19 HLA-DQA2 C6orf10 LTA HLA-DOA AGPAT1 VARS BRD2 MIR6834 HLA-DPA1 LOC100507547 TNXA HLA-DPB2 COL11A2 C6orf47 CYP21A2 DDX39B-AS1 MIR6873 ATP6V1G2-DDX39B PBX2 DAXX MSH5 WDR46 GPANK1 LY6G5B LST1
dgv10486n54 Chr.6:32187671 - 32193653 on Build GRCh38 Loss PBX2 GPSM3
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PPT2-EGFL8 LOC100507547 PRRT1 AGER EGFL8 FKBPL GPSM3 PPT2 MIR6721 MIR6833 PBX2 AGPAT1 RNF5 NOTCH4 TNXB ATF6B
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MIR5004 LY6G6E EHMT2 GPSM3 HLA-DQB1-AS1 PSMB9 LTB BAG6 C6orf25 PSMB8-AS1 ATF6B HCG26 HLA-DRB1 ATP6V1G2 C2-AS1 HCG24 DXO AGER PHF1 LSM2 HSPA1L LY6G6D APOM C6orf48 DDX39B HLA-DQB1 RPS18 NEU1 TAP2 LOC101929163 PFDN6 HLA-DPB1 LOC100287329 RGL2 HLA-DOB MCCD1 HLA-DMB ABHD16A MIR3135B HSPA1B PPT2 RING1 SNORD117 SNORD48 ZBTB9 HLA-DMA SAPCD1-AS1 NOTCH4 TNF LOC102725068 MIR1236 KIFC1 EGFL8 VWA7 HLA-DRA MIR6721 SKIV2L DDAH2 HSD17B8 PPP1R2P1 LY6G5C MIR219A1 TAPBP MIR4646 TNXB SAPCD1 NELFE LY6G6C PRRT1 CLIC1 HCG25 LY6G6F HCP5 MIR6832 SNORA38 PSMB8 SYNGAP1 NCR3 AIF1 HLA-DQA1 SNORD52 LOC100294145 CYP21A1P MSH5-SAPCD1 PRRC2A NFKBIL1 ZBTB12 MICB C4A B3GALT4 BTNL2 CSNK2B CUTA HLA-DRB6 CFB HSPA1A RXRB MIR6833 C4B VPS52 SNORD84 RNF5 HCG23 TAP1 C2 HLA-DRB5 ZBTB22 SLC39A7 SLC44A4 PPT2-EGFL8 HLA-DQB2 FKBPL STK19 HLA-DQA2 C6orf10 LTA HLA-DOA AGPAT1 VARS BRD2 MIR6834 HLA-DPA1 LOC100507547 TNXA HLA-DPB2 COL11A2 C6orf47 CYP21A2 DDX39B-AS1 MIR6873 ATP6V1G2-DDX39B PBX2 DAXX MSH5 WDR46 GPANK1 LY6G5B LST1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G6C PRRT1 CLIC1 LY6G6F LY6G6E HCP5 EHMT2 MIR6832 GPSM3 SNORA38 NCR3 LTB AIF1 SNORD52 BAG6 C6orf25 CYP21A1P MSH5-SAPCD1 PRRC2A NFKBIL1 ZBTB12 ATF6B MICB C4A HCG26 BTNL2 CSNK2B ATP6V1G2 C2-AS1 DXO AGER LSM2 HSPA1L CFB LY6G6D APOM C6orf48 HSPA1A MIR6833 DDX39B C4B SNORD84 RNF5 NEU1 HCG23 C2 LOC101929163 SLC44A4 MIR6891 PPT2-EGFL8 LOC100287329 FKBPL MCCD1 ABHD16A STK19 HSPA1B PPT2 C6orf10 SNORD117 SNORD48 LTA AGPAT1 SAPCD1-AS1 MICA NOTCH4 VARS TNF LOC102725068 LOC100507547 MIR1236 HLA-B TNXA EGFL8 VWA7 C6orf47 CYP21A2 DDX39B-AS1 HLA-DRA MIR6721 ATP6V1G2-DDX39B SKIV2L DDAH2 PBX2 LY6G5C MSH5 MIR4646 TNXB SAPCD1 NELFE GPANK1 LY6G5B LST1

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