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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31660303 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01635811_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 470 NP_067007.3
AJ245433.1 1 431 CAB51603.1
AK315349.1 1 159
BC012950.1 1 470 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv462871 Chr.6:31607499 - 31664357 on Build GRCh38 Loss BAG6 C6orf47 GPANK1 SNORA38 PRRC2A APOM MIR6832 AIF1
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion ATP6V1G2 CYP21A2 PBX2 NFKBIL1 ABHD16A APOM HLA-DRB5 HSPA1A LY6G6D DXO TNF NCR3 DDAH2 ATP6V1G2-DDX39B HLA-DRB6 TNXB PPT2 HCG23 LTA GPSM3 BAG6 GPANK1 NOTCH4 TNXA RNF5 PRRC2A NELFE MIR4646 LTB CFB LOC100507547 MSH5 C2 VWA7 SNORD48 MIR6833 LY6G6C PPT2-EGFL8 LOC102725068 NEU1 AIF1 STK19 SLC44A4 C6orf47 LOC100287329 VARS MIR6721 SNORD117 CLIC1 SKIV2L SAPCD1-AS1 MICB DDX39B-AS1 SNORD52 HCP5 LY6G5C DDX39B C6orf25 HLA-DRA ZBTB12 MSH5-SAPCD1 LSM2 LOC101929163 EHMT2 MIR1236 C6orf10 SNORD84 CYP21A1P HCG26 C6orf48 FKBPL LY6G6F LY6G5B MCCD1 EGFL8 LY6G6E C4B AGER HSPA1L HSPA1B AGPAT1 C4A SNORA38 PRRT1 BTNL2 C2-AS1 SAPCD1 CSNK2B ATF6B MIR6832 LST1 HLA-DRB1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MIR3135B CYP21A2 B3GALT4 HLA-DOB NFKBIL1 APOM TAP1 SYNGAP1 HSPA1A LOC100294145 DXO ATP6V1G2-DDX39B TNXB HLA-DQA1 PSMB8-AS1 HCG23 HLA-DPB2 DAXX GPSM3 BAG6 NOTCH4 HLA-DQB2 TNXA PRRC2A PSMB8 MIR5004 MIR4646 MSH5 C2 VWA7 SNORD48 LY6G6C RPS18 LOC102725068 NEU1 AIF1 CUTA STK19 SLC44A4 C6orf47 VARS MIR6721 HLA-DQA2 SNORD117 SAPCD1-AS1 DDX39B-AS1 SNORD52 HCP5 HLA-DMA DDX39B VPS52 HLA-DRA HLA-DPA1 ZBTB12 WDR46 ZBTB9 HLA-DMB COL11A2 LOC101929163 EHMT2 SNORD84 HCG26 C6orf48 PHF1 MCCD1 KIFC1 PPP1R2P1 AGER HSPA1B AGPAT1 C4A C2-AS1 CSNK2B ATF6B MIR6832 LST1 ATP6V1G2 HLA-DQB1-AS1 RGL2 PBX2 HCG24 ABHD16A MIR219A1 HLA-DRB5 LY6G6D TNF NCR3 DDAH2 TAP2 HLA-DRB6 MIR6873 PPT2 LTA MIR6834 HCG25 GPANK1 RNF5 NELFE LTB CFB LOC100507547 TAPBP BRD2 MIR6833 PPT2-EGFL8 ZBTB22 SLC39A7 LOC100287329 HLA-DQB1 HSD17B8 CLIC1 SKIV2L MICB PFDN6 LY6G5C C6orf25 MSH5-SAPCD1 LSM2 MIR1236 C6orf10 CYP21A1P RXRB HLA-DOA FKBPL HLA-DPB1 LY6G6F LY6G5B EGFL8 PSMB9 LY6G6E C4B HSPA1L SNORA38 PRRT1 BTNL2 SAPCD1 RING1 HLA-DRB1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss ATP6V1G2 CYP21A2 NFKBIL1 ABHD16A APOM HSPA1A LY6G6D DXO TNF NCR3 DDAH2 ATP6V1G2-DDX39B TNXB LTA BAG6 GPANK1 TNXA PRRC2A NELFE MIR4646 LTB CFB MSH5 HLA-B C2 VWA7 SNORD48 LY6G6C MICA LOC102725068 NEU1 AIF1 STK19 SLC44A4 C6orf47 LOC100287329 VARS SNORD117 CLIC1 SKIV2L SAPCD1-AS1 MICB DDX39B-AS1 SNORD52 HCP5 LY6G5C DDX39B C6orf25 ZBTB12 MSH5-SAPCD1 LSM2 EHMT2 MIR1236 SNORD84 CYP21A1P HCG26 C6orf48 LY6G6F LY6G5B MCCD1 LY6G6E C4B HSPA1L HSPA1B C4A SNORA38 C2-AS1 SAPCD1 MIR6891 CSNK2B MIR6832 LST1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MIR3135B CYP21A2 B3GALT4 HLA-DOB NFKBIL1 APOM TAP1 SYNGAP1 HSPA1A LOC100294145 DXO ATP6V1G2-DDX39B TNXB HLA-DQA1 PSMB8-AS1 HCG23 HLA-DPB2 DAXX GPSM3 BAG6 NOTCH4 HLA-DQB2 TNXA PRRC2A PSMB8 MIR5004 MIR4646 MSH5 C2 VWA7 SNORD48 LY6G6C RPS18 LOC102725068 NEU1 AIF1 CUTA STK19 SLC44A4 C6orf47 VARS MIR6721 HLA-DQA2 SNORD117 SAPCD1-AS1 DDX39B-AS1 SNORD52 HCP5 HLA-DMA DDX39B VPS52 HLA-DRA HLA-DPA1 ZBTB12 WDR46 ZBTB9 HLA-DMB COL11A2 LOC101929163 EHMT2 SNORD84 HCG26 C6orf48 PHF1 MCCD1 KIFC1 PPP1R2P1 AGER HSPA1B AGPAT1 C4A C2-AS1 CSNK2B ATF6B MIR6832 LST1 ATP6V1G2 HLA-DQB1-AS1 RGL2 PBX2 HCG24 ABHD16A MIR219A1 HLA-DRB5 LY6G6D TNF NCR3 DDAH2 TAP2 HLA-DRB6 MIR6873 PPT2 LTA MIR6834 HCG25 GPANK1 RNF5 NELFE LTB CFB LOC100507547 TAPBP BRD2 MIR6833 PPT2-EGFL8 ZBTB22 SLC39A7 LOC100287329 HLA-DQB1 HSD17B8 CLIC1 SKIV2L MICB PFDN6 LY6G5C C6orf25 MSH5-SAPCD1 LSM2 MIR1236 C6orf10 CYP21A1P RXRB HLA-DOA FKBPL HLA-DPB1 LY6G6F LY6G5B EGFL8 PSMB9 LY6G6E C4B HSPA1L SNORA38 PRRT1 BTNL2 SAPCD1 RING1 HLA-DRB1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss ATP6V1G2 CYP21A2 PBX2 NFKBIL1 ABHD16A APOM HSPA1A LY6G6D DXO TNF NCR3 DDAH2 ATP6V1G2-DDX39B TNXB PPT2 HCG23 LTA GPSM3 BAG6 GPANK1 NOTCH4 TNXA RNF5 PRRC2A NELFE MIR4646 LTB CFB LOC100507547 MSH5 HLA-B C2 VWA7 SNORD48 MIR6833 LY6G6C MICA PPT2-EGFL8 LOC102725068 NEU1 AIF1 STK19 SLC44A4 C6orf47 LOC100287329 VARS MIR6721 SNORD117 CLIC1 SKIV2L SAPCD1-AS1 MICB DDX39B-AS1 SNORD52 HCP5 LY6G5C DDX39B C6orf25 HLA-DRA ZBTB12 MSH5-SAPCD1 LSM2 LOC101929163 EHMT2 MIR1236 C6orf10 SNORD84 CYP21A1P HCG26 C6orf48 FKBPL LY6G6F LY6G5B MCCD1 EGFL8 LY6G6E C4B AGER HSPA1L HSPA1B AGPAT1 C4A SNORA38 PRRT1 BTNL2 C2-AS1 SAPCD1 MIR6891 CSNK2B ATF6B MIR6832 LST1
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion BAG6 C6orf47 GPANK1 PRRC2A ABHD16A APOM LY6G6F LY6G5B MIR4646 LY6G6E LY6G5C SNORA38 CSNK2B MIR6832 AIF1
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss ATP6V1G2 C6orf47 LOC100287329 NFKBIL1 SNORD117 ABHD16A APOM DDX39B-AS1 TNF LY6G5C NCR3 DDX39B ATP6V1G2-DDX39B LTA BAG6 SNORD84 GPANK1 PRRC2A LY6G5B LTB MCCD1 SNORA38 CSNK2B MIR6832 LST1 AIF1

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